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SCNpilot_cont_500_bf_scaffold_629_11

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: comp(14627..16099)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEL4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 497.0
  • Bit_score: 527
  • Evalue 1.90e-146
Type IV / VI secretion system protein, DotU family {ECO:0000313|EMBL:EYR83992.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 497.0
  • Bit_score: 527
  • Evalue 2.70e-146
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 510.0
  • Bit_score: 275
  • Evalue 3.20e-71

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1473
ATGGCCGATCCGTTCTTCGATCCCCCCGACGCCGACGATACCATCCGTCGGCCCTTGCCCCAGCCAAGGCAGGCTTCCCGGCCCGGCGCCGCGAACCTGTTCCTCGACGACGGCTTCGATGACCAGATCGACGACGCGTTCGGTTCCGCCCTCGCCGCGCCGCGCGGACGCCGCTCCGAGGGTTTTGACGACCTCCTCGGCGACGACAGGCTCGCGGACGGCTTCGGCGCCGATACCTATCTGAAATCCGGCAAGGAGGCGGCGATCGAGAAGGCGTTCGATCTCGCCTCGGTCAATCCGCTCGTCAGCGCCGCGGCGCCGCTCCTCTGGTTGGCGGGACGGCTGAACGAGAGCGCTCCGCCTGAGGACGTGGAGCGCTTCCGCCAGCGCATCCTCGCCGAGATCAAGCAATTCGAGACGGCGGCAATGGCGCGCGACGTCCCGCCCCGGCTCGTGCGCATGACGCGCTATGCCATCGCGGCGACGCTCGACGACATCATCCTCAACACGGAATGGGGCGGCCAGGCGGTGTGGGCCGGCCGCAGCCTCGTCAGCTCGCTCTACAACGAGACCTGGGGCGGCGAACGCTTCTACGAATTGCTCAACCAGATGCGCAGGGCTCCAGACGAGAATATCGACGGCCTGGAGTTCATGGCGATCTGCCTGGCGGTCGGGTTCTCCGGCAAGTATCGCGTCATGGAGGGCGGCCAGGGACGCCTCAGCCGGCTGCGCCACGAGCTTTACCGCATTATCCGCCGCGTCCGCGGCCCCTACGACCGCGAGCTGTCGCCGCCATGGGAGCCGGTCGCCGCACCGCATGTGGCCCCGAAATCGGCCCGCGCCGCCTGGATCATCGGCATCGTGGCGCTGCTTCTCGCCGCCATCCTCTGGGCGCTGTCGAGCTTCGATTTGCGCCAGCGCGTGGACACCGCGGTACAGCAGATCGATGCGCTCGCGCCGGCGGTTCCCGTCGTCGTGACGGCGCCGGCGATCCCCAACATCCCGGAGCCGGTGAAGCCCAAGGTGAAGACGCAGATGGAGCGCCTGCAGGGCTTCCTCGCCGACGACATCGCCGCCCGGCGCGTCGAGCTGGCCAGGGTGAACGACAAGATCGCCATCCGCATGCTGAACGCCTCCTTTCCGTCGGGTGGCGTCGACCTCGCCGCGTCGAGCGATCCGCTCGTCGGCCGCATCGCCGCCGCGATCAATCACGAGAAGGGGCCGATCGTCGTCGTGGGCAACACCGACGACGTGCCCGTGCCTTACGGCAGCAAGCTCGGCGACAACATGGCCATCTCCAAGGCACGCGCCGATTCAGCCGCGGAGGTGCTGAAGAAGGGGCTTGACGATCCCTCGCGCGTCACCACCGTGGGCCGCGGATCGAACGATCCGATCGCCTCCAACTCGACCGCCGAGGGCCGCGAGAAGAACCGGCGCGTCGAGTTCCAGATCGACGCGGAGGCGGCAAGCTGA
PROTEIN sequence
Length: 491
MADPFFDPPDADDTIRRPLPQPRQASRPGAANLFLDDGFDDQIDDAFGSALAAPRGRRSEGFDDLLGDDRLADGFGADTYLKSGKEAAIEKAFDLASVNPLVSAAAPLLWLAGRLNESAPPEDVERFRQRILAEIKQFETAAMARDVPPRLVRMTRYAIAATLDDIILNTEWGGQAVWAGRSLVSSLYNETWGGERFYELLNQMRRAPDENIDGLEFMAICLAVGFSGKYRVMEGGQGRLSRLRHELYRIIRRVRGPYDRELSPPWEPVAAPHVAPKSARAAWIIGIVALLLAAILWALSSFDLRQRVDTAVQQIDALAPAVPVVVTAPAIPNIPEPVKPKVKTQMERLQGFLADDIAARRVELARVNDKIAIRMLNASFPSGGVDLAASSDPLVGRIAAAINHEKGPIVVVGNTDDVPVPYGSKLGDNMAISKARADSAAEVLKKGLDDPSRVTTVGRGSNDPIASNSTAEGREKNRRVEFQIDAEAAS*