ggKbase home page

SCNpilot_cont_500_bf_scaffold_629_12

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: comp(16113..17450)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036C9A3D similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 446.0
  • Bit_score: 534
  • Evalue 1.10e-148
Type VI secretion protein, VC_A0114 family {ECO:0000313|EMBL:EYR83991.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 445.0
  • Bit_score: 577
  • Evalue 1.60e-161
hypothetical protein; K11893 type VI secretion system protein ImpJ similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 445.0
  • Bit_score: 455
  • Evalue 2.60e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
ATGCCTGTCGACAGCAAGGTGATCTGGTCCGAGGGAATGTTCATCCGGGCCCAGCACTTCCAGCAGGAAGCGCGCTATGTCGAGGGGGTCTCGCGCCATCTCTTCCGAGGCCTGCGCGGCTATGGCTGGGGTCTGTCGGAGCTGAAACTCAACCGCGATCTTCTGTCGATCGGCAAGTTCGCGGTCGAGCGCGCTTCCGGCATCTTCCCGGACGGCACGCCCTTCGACTGGCCGGACGATGTCGACGAGGAGGCCATGCGGCCGCTCGAACTCGACGAGGGCGCGCGCAACCAGATCGTCTATCTGACCCTGCCGGCGCGCCGGCCCGGCGGCATGGAAGTGGCGAACGGCGCCGCCGACGCCATCACGCGCTATGTCGCGCACGATCTGACCGTCGCCGATTCCGCCGCGTCCGAAGAAACCTCCTCGACGATCACGATCGGCAAGCTGCGCATCCGCTGCGCCCCGCAGGGCGCCGAGCGCGGCGGTCTGCTCGGCCTCGGCGTCGCCCGCATCGGCGAGGTCCGCTCGGACAACACCGTCATCCTCGACGAGACCTTCATCCCGCCCCTGCTTGATATCCGCGTGTCGCAGGTGGTGAGCGGCTACGTCACCGAGATCGTCGGACTGCTCAATCACCGCGGTCAGGCCATCGCGTCGCGGCTGGCCGCCGGCAGCGAAGGCACCTCCGGCGAATTGTCGGACACGCTGATGCTTCAGGGCGTCAACCGCTGGCAGCCCATCTTCACCCATTTGTCGACGGCCTCGATGGTCCATCCCGAGACCGCTTACGTCAACATGGTCTCGCTCGCGGGCGAGCTTGCGACCTTTGCCCGCGCAGACCACCGGCCGCCGATGTTCCCCGCCTATGACCATGACGACCTGCAGGCGACCTTCGCGCCCGTCATGACCTCGCTGAGGCAGGCGCTGAGCGCCGTGCTCGAGCGCGGTGCGCTGACGATCCCGCTCGTCCAGCACCGCTACGGCATTCGCGTCGCGGAAGTGCCCGATCGCTCGATCTATTCGAAATACACGCTCATCCTGGTCGCCCGCGCCGACATGCCGGCCGAGACGCTGGCGAAGCGGCTCGTCGGGCAGGCGAAGGTCGGGCCGGTGGAGCAGATCCGTGAGCTCGTAAACGCCGCCCTGCCCGGCATCAGGCTGCGCGGCCTGACCGCCGCGCCGCGGCAGATCCCGTACCATACAGGCAAGGCCTATTTCGAGTTGGACAGGACGAGCCCCGTCTGGAAGCAGATCGCATCCTCCAGCGCGCTGGCGATCCATGTCGCCGGGGATTTCCCCGGCATCGAACTTGAATTGTGGGCCGTCAAGGATTGA
PROTEIN sequence
Length: 446
MPVDSKVIWSEGMFIRAQHFQQEARYVEGVSRHLFRGLRGYGWGLSELKLNRDLLSIGKFAVERASGIFPDGTPFDWPDDVDEEAMRPLELDEGARNQIVYLTLPARRPGGMEVANGAADAITRYVAHDLTVADSAASEETSSTITIGKLRIRCAPQGAERGGLLGLGVARIGEVRSDNTVILDETFIPPLLDIRVSQVVSGYVTEIVGLLNHRGQAIASRLAAGSEGTSGELSDTLMLQGVNRWQPIFTHLSTASMVHPETAYVNMVSLAGELATFARADHRPPMFPAYDHDDLQATFAPVMTSLRQALSAVLERGALTIPLVQHRYGIRVAEVPDRSIYSKYTLILVARADMPAETLAKRLVGQAKVGPVEQIRELVNAALPGIRLRGLTAAPRQIPYHTGKAYFELDRTSPVWKQIASSSALAIHVAGDFPGIELELWAVKD*