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SCNpilot_cont_500_bf_scaffold_629_13

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: comp(17492..17998)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion lipoprotein, VC_A0113 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDC8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 168.0
  • Bit_score: 225
  • Evalue 5.40e-56
Type VI secretion lipoprotein, VC_A0113 family {ECO:0000313|EMBL:EYR83990.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 168.0
  • Bit_score: 225
  • Evalue 7.50e-56
hypothetical protein; K11906 type VI secretion system protein VasD similarity KEGG
DB: KEGG
  • Identity: 34.4
  • Coverage: 160.0
  • Bit_score: 90
  • Evalue 5.00e-16

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGGTGCGCTTTCTCCGGCTGTTCGTGATCGTCTTCCTGGCGTTCGCCCTCGCCTCGTGCGGCATCTTCGGCAAGAAGAAGCCGCCGGCGAAGGAAATCGAGATCAAGCCGGCGCCGCAGAATGCCGGCCTCGACCTGCTGGCCGTTGCCTCGCCGCTGGTCAATCCGCAGCCCGACGGGCAGCCCTCGCCAACGGTCGTGCGGGTGTATCTCCTGTCGGGCGACACCGCTTTCGCGAACGCGAGCTTCCGCCAGCTTTGGGAGAACGATGCGAAGACGCTGGGACCGACCATGCTTGGCAAGGCGGAACTCATCGTCCAGCCGGGCAGCGTCGCCCATGTCAAGGCGCCCATGGCGGAAGGCACGGTGCTGGTCGCGGTGGTCGTCGGGTTCCGCGACTTTCAAGACGCCAAGTGGCGTGCGATGGTGCCCTTGCAGGGCGAAAAGACGTTGAAATTGAAGGCGGACCTGAATTCGCTTTCAGTCAACCTCGGCCCGCAGGATTAG
PROTEIN sequence
Length: 169
MVRFLRLFVIVFLAFALASCGIFGKKKPPAKEIEIKPAPQNAGLDLLAVASPLVNPQPDGQPSPTVVRVYLLSGDTAFANASFRQLWENDAKTLGPTMLGKAELIVQPGSVAHVKAPMAEGTVLVAVVVGFRDFQDAKWRAMVPLQGEKTLKLKADLNSLSVNLGPQD*