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scnpilot_cont_500_p_scaffold_48

Search features with annotation key words

Displaying items 151-171 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_48_151
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171339..172235)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002EF4096 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEQ53294.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlor
hypothetical protein
scnpilot_cont_500_p_scaffold_48_152
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172247..172891)
DNA (645bp) protein (215aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=1522072 species="B
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00030E56B9
luxI; N-acyl-L-homoserine lactone synthetase
scnpilot_cont_500_p_scaffold_48_153
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172977..173714)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002E7AF4D
LuxR family transcriptional regulator {ECO:0000313|EMBL:KEQ53292.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph
LuxR family transcriptional regulator
scnpilot_cont_500_p_scaffold_48_154
unknown

Not on your lists

comp(173963..175066)
DNA (1104bp) protein (368aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_48_155
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175066..175917)
DNA (852bp) protein (284aa)
membrane protein n=1 Tax=Alphaproteobacteria RepID=UPI000262C781 rbh
Membrane protein {ECO:0000313|EMBL:KFD26954.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (
membrane protein
scnpilot_cont_500_p_scaffold_48_156
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176099..176782)
DNA (684bp) protein (228aa)
Transporter n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJI6_9SPHN rbh
transporter rbh
Transporter {ECO:0000313|EMBL:EHJ58513.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaro
scnpilot_cont_500_p_scaffold_48_157
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176789..179260)
DNA (2472bp) protein (824aa)
Heavy metal translocating P-type ATPase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7D5_9SPHN rbh
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AGH50424.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
scnpilot_cont_500_p_scaffold_48_158
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179257..179874)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Alphaproteobacteria RepID=UPI000262C77E
Uncharacterized protein {ECO:0000313|EMBL:KFL44937.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
scnpilot_cont_500_p_scaffold_48_159
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179900..180514)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000317DE79
Scaffold19, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30676.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_cont_500_p_scaffold_48_160
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180604..181098)
DNA (495bp) protein (165aa)
UPI0003D66734 related cluster n=1 Tax=unknown RepID=UPI0003D66734
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETI58573.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
scnpilot_cont_500_p_scaffold_48_161
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181169..184408)
DNA (3240bp) protein (1080aa)
cation transporter n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C77A rbh
Cation transporter {ECO:0000313|EMBL:KFD26961.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae
CzcA family heavy metal efflux pump
scnpilot_cont_500_p_scaffold_48_162
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184413..185579)
DNA (1167bp) protein (389aa)
hemolysin D n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036EAE24 rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KEZ16604.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
czcB; metal ion efflux membrane fusion protein family
scnpilot_cont_500_p_scaffold_48_163
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185583..186845)
DNA (1263bp) protein (421aa)
transporter n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C778 rbh
Transporter {ECO:0000313|EMBL:KEZ12088.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
heavy metal efflux system protein
scnpilot_cont_500_p_scaffold_48_164
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187833..190265)
DNA (2433bp) protein (811aa)
UPI0003CEEB63 related cluster n=1 Tax=unknown RepID=UPI0003CEEB63 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFD25691.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
hypothetical protein
scnpilot_cont_500_p_scaffold_48_165
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190262..190891)
DNA (630bp) protein (210aa)
UPI0003CEB5F9 related cluster n=1 Tax=unknown RepID=UPI0003CEB5F9
Uncharacterized protein {ECO:0000313|EMBL:KFD25690.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
scnpilot_cont_500_p_scaffold_48_166
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190888..192642)
DNA (1755bp) protein (585aa)
UPI0003CEFE0B related cluster n=1 Tax=unknown RepID=UPI0003CEFE0B
Uncharacterized protein {ECO:0000313|EMBL:KFD25689.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
hypothetical protein
scnpilot_cont_500_p_scaffold_48_167
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

193243..194937
DNA (1695bp) protein (565aa)
UPI0003D5ADE1 related cluster n=1 Tax=unknown RepID=UPI0003D5ADE1 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI64311.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_48_168
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194934..196697
DNA (1764bp) protein (588aa)
UPI0003D68E96 related cluster n=1 Tax=unknown RepID=UPI0003D68E96 rbh
Chemotaxis protein {ECO:0000313|EMBL:ETI64275.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100
hypothetical protein
scnpilot_cont_500_p_scaffold_48_169
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196801..197589
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DGS9_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL13473.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
scnpilot_cont_500_p_scaffold_48_170
unknown

Not on your lists

comp(197602..198477)
DNA (876bp) protein (292aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_48_171
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198987..199862
DNA (876bp) protein (292aa)
antirepressor n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037CDC0D
antirestriction protein ArdC
Antirestriction protein ArdC {ECO:0000313|EMBL:AJA11375.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
Displaying items 151-171 of 171 in total

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