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scnpilot_cont_500_p_scaffold_48

Search features with annotation key words

Displaying items 61-90 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_48_61
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67418..67849)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002898EB9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48044.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_cont_500_p_scaffold_48_62
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68005..68436
DNA (432bp) protein (144aa)
ApaG n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E7V2_9SPHN
magnesium transporter ApaG
ApaG {ECO:0000313|EMBL:EHJ62595.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativor
scnpilot_cont_500_p_scaffold_48_63
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68478..69260
DNA (783bp) protein (261aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8SES8_9SPHN rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EJU11329.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_48_64
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69309..70091)
DNA (783bp) protein (261aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6E516 rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EIZ80981.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
3-hydroxybutyrate dehydrogenase
scnpilot_cont_500_p_scaffold_48_65
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(70170..70760)
DNA (591bp) protein (197aa)
hypothetical protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] Tax=RBG_16_Chloroflexi_52_11_curated
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13IX6_BURXL
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase family protein
scnpilot_cont_500_p_scaffold_48_66
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70760..72274)
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036C8F37
Uncharacterized protein {ECO:0000313|EMBL:EGD57769.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_48_67
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72664..73677
DNA (1014bp) protein (338aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003120CC0 rbh
phosphate ABC transporter periplasmic phosphate-binding protein
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomona
scnpilot_cont_500_p_scaffold_48_68
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73674..74612
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035E14E4 rbh
phosphate ABC transporter permease
Phosphate ABC transporter, inner membrane subunit PstC {ECO:0000313|EMBL:ABQ67469.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingom
scnpilot_cont_500_p_scaffold_48_69
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74612..75460
DNA (849bp) protein (283aa)
phosphate ABC transporter permease n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003799E3A rbh
Phosphate ABC transporter permease protein PstA {ECO:0000313|EMBL:GAO37901.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;
phosphate ABC transporter inner membrane subunit PstA
scnpilot_cont_500_p_scaffold_48_70
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75457..76314
DNA (858bp) protein (286aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter ATP-binding protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4Q053_9CAUL rbh
phosphate abc transporter, atpase subunit
scnpilot_cont_500_p_scaffold_48_71
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76558..77772)
DNA (1215bp) protein (405aa)
5-aminolevulinate synthase (EC:2.3.1.37)
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:000025
5-aminolevulinate synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6E909 rbh
scnpilot_cont_500_p_scaffold_48_72
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77933..78748)
DNA (816bp) protein (272aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=983920 species="Bacteria; Prote
glutamate racemase (EC:5.1.1.3)
glutamate racemase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B570D6 rbh
scnpilot_cont_500_p_scaffold_48_73
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78881..79498
DNA (618bp) protein (206aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W228_9SPHN
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
acyl-phosphate glycerol-3-phosphate acyltransferase
scnpilot_cont_500_p_scaffold_48_74
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79495..80721
DNA (1227bp) protein (409aa)
DNA processing protein DprA, putative n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZA61_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH41796.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
DNA processing protein DprA
scnpilot_cont_500_p_scaffold_48_75
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81024..83651
DNA (2628bp) protein (876aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=473781 species="Bacteria; Proteobact
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Sphingomonas sp. LH128 RepID=J8VM77_9SPHN rbh
scnpilot_cont_500_p_scaffold_48_76
unknown

Not on your lists

83848..85236
DNA (1389bp) protein (463aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_48_77
unknown

Not on your lists

comp(85237..86874)
DNA (1638bp) protein (546aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_48_78
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86884..88482)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7C9_NOVAD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO56557.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_48_79
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88683..89597)
DNA (915bp) protein (305aa)
GTPase Era n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EHX0_9SPHN rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
GTPase Era
scnpilot_cont_500_p_scaffold_48_80
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89594..90325)
DNA (732bp) protein (244aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3 n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CAH6_9SPHN
ribonuclease III
scnpilot_cont_500_p_scaffold_48_81
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90322..91170)
DNA (849bp) protein (283aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
Signal peptidase I, Serine peptidase, MEROPS family S26A n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7C5_NOVAD rbh
scnpilot_cont_500_p_scaffold_48_82
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91411..92940
DNA (1530bp) protein (510aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GTP5_9SPHN rbh
scnpilot_cont_500_p_scaffold_48_83
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93098..95086
DNA (1989bp) protein (663aa)
Putative peptidase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEG0_9SPHN rbh
putative peptidase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_cont_500_p_scaffold_48_84
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95177..96523
DNA (1347bp) protein (449aa)
NADPH-glutathione reductase (EC:1.8.1.7)
Glutathione reductase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJN9_9SPHN rbh
Glutathione reductase {ECO:0000313|EMBL:GAD48412.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
scnpilot_cont_500_p_scaffold_48_85
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96726..97832)
DNA (1107bp) protein (369aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=158500 species="Bacteria
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VY83_9SPHN rbh
scnpilot_cont_500_p_scaffold_48_86
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97840..98502)
DNA (663bp) protein (221aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000255|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000255|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000255|HAMAP-Rule:MF_00109};; TaxID=279238 species="Bacteria; Proteobacteria; Alphapr
Shikimate kinase n=2 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=AROK_NOVAD
scnpilot_cont_500_p_scaffold_48_87
unknown

Not on your lists

98592..98801
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_48_88
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98801..100687
DNA (1887bp) protein (629aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y5K3_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD48401.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_48_89
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100734..101591
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FA145D rbh
integrase
Tax=BJP_IG2102_Porphyrobacter_62_18
scnpilot_cont_500_p_scaffold_48_90
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101641..102588
DNA (948bp) protein (316aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G730_NOVAD rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
Displaying items 61-90 of 171 in total

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