ggKbase home page

scnpilot_cont_500_p_scaffold_48_63

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 68478..69260

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8SES8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 261.0
  • Bit_score: 392
  • Evalue 3.90e-106
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EJU11329.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 261.0
  • Bit_score: 392
  • Evalue 5.50e-106
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 269.0
  • Bit_score: 375
  • Evalue 1.40e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. LH128 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGAAGCGTACCCATCTTCCTCTCAATGCCTTGCGCGTGTTTGACGCGGCGGCGCGTCACCTGTCCTTTACCCGCGCCGCCGACGAACTGGCCGTGACCCCGGCGGCCGTCGGGCAACAGATCCGCGCGCTTGAGGATCTGCTGGGCGTGGTGCTGTTTCGCCGCACGACCAAGGGGCTGGAACTGACCGACGAGGCGCAGGCGGGGCTGGAGCCTTTGCGCGCCGGTTTCCTGCAATTTGAGGATGCGGTGCAGGCGATGCAGGCGGGGCAATCCTCGCATGTTTACACGATTGCCGCCCCGCGCGACATTTTCGCGGCATGGCTGGCGCCGCGTCTGGCCGCGTTCCGTGCGGCCAATCCCGACATTCGCGTCGTGCTGGTCGATGGCGATGCCACCGATTTTACCGAGGCCAACCTCGACCTTGCCATGCGCCTGTCCGAAGGGCCGGGCGATCTGGAAGGTGTGGCGATTGGCGAGGCGCAGCAGGCGGTTGTGGGCGAGGGCGAGTGGATCGCATGGCCCAGCGACCCCAATCCGGCGGGCGAGGGGATCGAGGCGGGCCTGCATGTGGGCGATGCGGGGCAGGCGATTGCGGCGGCCGCTGCCGGGCTTGGTCGCGCGCGTGTGCCTTTGCTCCTGGCGCAGGGCTGGCGCGATCTGGGTCGCATCCCCGGCTTTGGCGAACCGGAACCCGCACGCAAAGCCTATTGGCTGGTAGCCCCCCTGCCGCAATGGCGCCAGAAAAAGGTCAAGGCGCTGGTCGCGCACTTGACGGCCTGA
PROTEIN sequence
Length: 261
MKRTHLPLNALRVFDAAARHLSFTRAADELAVTPAAVGQQIRALEDLLGVVLFRRTTKGLELTDEAQAGLEPLRAGFLQFEDAVQAMQAGQSSHVYTIAAPRDIFAAWLAPRLAAFRAANPDIRVVLVDGDATDFTEANLDLAMRLSEGPGDLEGVAIGEAQQAVVGEGEWIAWPSDPNPAGEGIEAGLHVGDAGQAIAAAAAGLGRARVPLLLAQGWRDLGRIPGFGEPEPARKAYWLVAPLPQWRQKKVKALVAHLTA*