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scnpilot_cont_500_p_scaffold_1764

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1764_1
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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186..530
DNA (345bp) protein (115aa)
Small multidrug resistance protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KCW9_METEX
Small multidrug resistance protein {ECO:0000313|EMBL:EHP94656.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Met
emrE; small multidrug efflux pump, DMT superfamily
scnpilot_cont_500_p_scaffold_1764_2
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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533..1078
DNA (546bp) protein (182aa)
Regulatory protein TetR n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YFA2_9RHIZ
Regulatory protein TetR {ECO:0000313|EMBL:EHH09583.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amo
TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1764_3
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1088..1573)
DNA (486bp) protein (162aa)
Probable phosphoglycerate mutase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98MW8_RHILO
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:ETA73019.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
phosphoglycerate mutase
scnpilot_cont_500_p_scaffold_1764_4
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1909..2724)
DNA (816bp) protein (272aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phospho
Phosphonoacetaldehyde hydrolase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9M8_9RHIZ rbh
phosphonoacetaldehyde hydrolase
scnpilot_cont_500_p_scaffold_1764_5
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2721..3923)
DNA (1203bp) protein (401aa)
Putative FAD dependent oxidoreductase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBE5_9RHIZ rbh
Putative FAD dependent oxidoreductase {ECO:0000313|EMBL:CCV13631.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
FAD dependent oxidoreductase
scnpilot_cont_500_p_scaffold_1764_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4129..5313
DNA (1185bp) protein (395aa)
Aspartate aminotransferase, PLP-dependent {ECO:0000313|EMBL:CDX18602.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDX18602.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phy
aromatic-amino-acid transaminase (EC:2.6.1.57) rbh
UPI0003D04DD9 related cluster n=1 Tax=unknown RepID=UPI0003D04DD9 rbh
scnpilot_cont_500_p_scaffold_1764_7
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5407..6270
DNA (864bp) protein (288aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19)
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H1H9_9RHIZ rbh
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:ESZ06500.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sour
scnpilot_cont_500_p_scaffold_1764_8
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6326..7717)
DNA (1392bp) protein (464aa)
GTPase HflX n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EQ50_9RHIZ rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobact
GTP-binding protein HflX
scnpilot_cont_500_p_scaffold_1764_9
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7718..7963)
DNA (246bp) protein (82aa)
RNA-binding protein Hfq n=13 Tax=Mesorhizobium RepID=HFQ_RHILO
RNA chaperone Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhi
scnpilot_cont_500_p_scaffold_1764_10
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8111..8974)
DNA (864bp) protein (288aa)
D-amino acid aminotransferase {ECO:0000313|EMBL:EHH11544.1}; EC=2.6.1.21 {ECO:0000313|EMBL:EHH11544.1};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacter
D-amino acid aminotransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9N5_9RHIZ rbh
class IV aminotransferase
scnpilot_cont_500_p_scaffold_1764_11
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9069..10466)
DNA (1398bp) protein (466aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQZ0_MESAW rbh
Nitrogen assimilation regulatory protein {ECO:0000313|EMBL:CDX22438.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
scnpilot_cont_500_p_scaffold_1764_12
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10420..12717)
DNA (2298bp) protein (766aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; M
UPI0003CFF1E8 related cluster n=1 Tax=unknown RepID=UPI0003CFF1E8 rbh
PAS sensor protein
scnpilot_cont_500_p_scaffold_1764_13
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12841..14298)
DNA (1458bp) protein (486aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YCR6_MESOW rbh
Fis family two component sigma-54 specific transcriptional regulator
Chemotaxis protein CheY {ECO:0000313|EMBL:ESY62760.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
scnpilot_cont_500_p_scaffold_1764_14
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14295..15425)
DNA (1131bp) protein (377aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; M
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9N9_9RHIZ rbh
nitrogen reguration protein nirB protein
scnpilot_cont_500_p_scaffold_1764_15
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15422..16447)
DNA (1026bp) protein (342aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobact
tRNA-dihydrouridine synthase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBD5_9RHIZ rbh
hypothetical protein
scnpilot_cont_500_p_scaffold_1764_16
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16709..17644
DNA (936bp) protein (312aa)
UPI0003D056B8 related cluster n=1 Tax=unknown RepID=UPI0003D056B8 rbh
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; M
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
scnpilot_cont_500_p_scaffold_1764_17
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17641..18129
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBL5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV13618.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
CinA domain-containing protein
scnpilot_cont_500_p_scaffold_1764_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18146..18601)
DNA (456bp) protein (152aa)
cyclase n=1 Tax=Rhizobium loti RepID=UPI00036E88CD
Cyclase/dehydrase {ECO:0000313|EMBL:CDX35730.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS33
cyclase/dehydrase
scnpilot_cont_500_p_scaffold_1764_19
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18612..19577)
DNA (966bp) protein (322aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
UPI0003CDFA28 related cluster n=1 Tax=unknown RepID=UPI0003CDFA28 rbh
lipoate synthase
scnpilot_cont_500_p_scaffold_1764_20
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19713..19967)
DNA (255bp) protein (85aa)
UPI0003CDD596 related cluster n=1 Tax=unknown RepID=UPI0003CDD596
Membrane protein {ECO:0000313|EMBL:ESY84191.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC22
hypothetical protein
scnpilot_cont_500_p_scaffold_1764_21
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20054..21499)
DNA (1446bp) protein (482aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacter
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
dihydrolipoamide dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI00037F68D8 rbh
scnpilot_cont_500_p_scaffold_1764_22
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21515..22150)
DNA (636bp) protein (212aa)
Lipolytic protein G-D-S-L family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TND5_MESCW rbh
G-D-S-L family lipolytic protein rbh
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ADV12817.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
scnpilot_cont_500_p_scaffold_1764_23
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22230..22415)
DNA (186bp) protein (62aa)
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (Fragment) n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YLC1_9RHIZ
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:EHH02939.1}; Flags: Fragment;; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Ph
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
Displaying 23 items

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