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SCNPILOT_CONT_300_BF_Rhizobiales_61_16

SCNPILOT_CONT_750_BF_Rhizobiales_62_2
In projects: SCNPILOT_CONT_750_BF

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 51-100 of 312 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_750_bf_scaffold_20450
Class: Betaproteobacteria (66.67%)
3 1895 bp 61.00 1.72 98.15
SCNpilot_cont_750_bf_scaffold_8799
Order: Rhizobiales (66.67%)
3 3664 bp 67.06 2.46 91.29
SCNpilot_cont_750_bf_scaffold_35972
Species: Devosia sp. DDB001 (66.67%)
3 1167 bp 63.07 1.50 98.46
SCNpilot_cont_750_bf_scaffold_33512
Class: Alphaproteobacteria (66.67%)
3 1239 bp 61.10 1.00 87.41
SCNpilot_cont_750_bf_scaffold_21531
Order: Rhizobiales (66.67%)
3 1812 bp 61.48 1.00 98.51
SCNpilot_cont_750_bf_scaffold_26196
Species: R_Betaproteobacteria_63_19 (66.67%)
3 1529 bp 58.01 2.62 92.41
SCNpilot_cont_750_bf_scaffold_16998
Species: Methylocella silvestris (66.67%)
3 2225 bp 66.25 1.91 99.10
SCNpilot_cont_750_bf_scaffold_18976
Order: Rhizobiales (100%)
3 2021 bp 61.60 1.24 92.48
SCNpilot_cont_750_bf_scaffold_32119 3 1282 bp 63.65 2.73 91.97
SCNpilot_cont_750_bf_scaffold_23841
Order: Rhizobiales (100%)
3 1656 bp 65.34 2.87 92.39
SCNpilot_cont_750_bf_scaffold_34675 3 1204 bp 60.22 2.08 88.46
SCNpilot_cont_750_bf_scaffold_38015
Class: Alphaproteobacteria (66.67%)
3 1110 bp 60.72 1.80 87.84
SCNpilot_cont_750_bf_scaffold_21570
Order: Rhizobiales (66.67%)
3 2654 bp 59.91 1.32 78.22
SCNpilot_cont_750_bf_scaffold_40067
Phylum: Proteobacteria (66.67%)
3 1052 bp 62.36 1.66 79.28
SCNpilot_cont_750_bf_scaffold_37891
Species: Mesorhizobium plurifarium (66.67%)
3 1113 bp 64.51 4.04 98.38
SCNpilot_cont_750_bf_scaffold_30292
Domain: Bacteria (66.67%)
3 1347 bp 57.76 1.11 98.00
SCNpilot_cont_750_bf_scaffold_23365
Species: Bosea sp. LC85 (100%)
3 1684 bp 64.61 2.38 97.62
SCNpilot_cont_750_bf_scaffold_41663
Order: Rhizobiales (100%)
3 1011 bp 62.12 1.00 91.10
SCNpilot_cont_750_bf_scaffold_32934
Species: Bosea sp. LC85 (66.67%)
3 1256 bp 61.39 1.00 99.84
SCNpilot_cont_750_bf_scaffold_25841
Class: Alphaproteobacteria (100%)
3 1547 bp 62.64 2.26 83.58
SCNpilot_cont_750_bf_scaffold_41932
Genus: Methylobacterium (66.67%)
3 1004 bp 60.46 1.49 92.03
SCNpilot_cont_750_bf_scaffold_41423
Species: Bradyrhizobium sp. DFCI-1 (50%)
2 1017 bp 62.44 1.47 72.86
SCNpilot_cont_750_bf_scaffold_36199
Species: Methylobacterium aquaticum (100%)
2 1160 bp 67.07 2.37 100.09
SCNpilot_cont_750_bf_scaffold_30064
Species: Methylocystis sp. SC2 (50%)
2 1356 bp 60.25 1.66 77.65
SCNpilot_cont_750_bf_scaffold_27856
Species: Agrobacterium tumefaciens (100%)
2 1451 bp 60.30 3.10 89.32
SCNpilot_cont_750_bf_scaffold_35291
Species: RBG_16_Betaproteobacteria_64_18_curated (50%)
2 1187 bp 59.81 1.68 94.02
SCNpilot_cont_750_bf_scaffold_21359
Species: R_RIF_OD1_13_60_25 (50%)
2 1825 bp 59.84 2.74 98.79
SCNpilot_cont_750_bf_scaffold_32696
Species: Rhizobium sp. R1-200B4 (50%)
2 1262 bp 58.72 1.00 75.12
SCNpilot_cont_750_bf_scaffold_32956
Species: Methylocella silvestris (100%)
2 1255 bp 61.04 1.59 99.20
SCNpilot_cont_750_bf_scaffold_28767
Species: Methylocella silvestris (50%)
2 1408 bp 58.95 1.95 51.99
SCNpilot_cont_750_bf_scaffold_25095
Species: Microcoleus sp. PCC 7113 (50%)
2 1584 bp 59.97 3.47 90.72
SCNpilot_cont_750_bf_scaffold_36983
Species: Ahrensia sp. R2A130 (50%)
2 1139 bp 62.34 2.41 83.49
SCNpilot_cont_750_bf_scaffold_35560
Species: Cystobacter violaceus (50%)
2 1179 bp 59.12 2.12 98.22
SCNpilot_cont_750_bf_scaffold_36216
Species: Nitratireductor aquibiodomus (50%)
2 1159 bp 62.73 2.59 99.65
SCNpilot_cont_750_bf_scaffold_32706
Species: Methylobacterium nodulans (50%)
2 1262 bp 65.85 2.38 97.23
SCNpilot_cont_750_bf_scaffold_27362
Species: Tistrella mobilis (50%)
2 1473 bp 60.42 2.38 84.93
SCNpilot_cont_750_bf_scaffold_37939
Species: RBG_16_Betaproteobacteria_64_18_curated (50%)
2 1112 bp 61.96 1.12 94.15
SCNpilot_cont_750_bf_scaffold_29849
Species: Methylobacterium sp. ME121 (50%)
2 1364 bp 68.11 1.10 96.99
SCNpilot_cont_750_bf_scaffold_34495
Species: Rhizobium sp. YS-1r (50%)
2 1210 bp 60.83 1.45 92.23
SCNpilot_cont_750_bf_scaffold_33874
Species: Methylocella silvestris (50%)
2 1228 bp 63.19 2.44 85.99
SCNpilot_cont_750_bf_scaffold_36994
Species: Methylocystis sp. SC2 (100%)
2 1138 bp 64.06 1.98 100.18
SCNpilot_cont_750_bf_scaffold_40392
Species: blood disease bacterium R229 (50%)
2 1044 bp 64.46 1.20 91.38
SCNpilot_cont_750_bf_scaffold_41714
Species: Azotobacter chroococcum (50%)
2 1009 bp 62.93 1.98 74.63
SCNpilot_cont_750_bf_scaffold_29861
Species: Bradyrhizobium sp. LTSPM299 (50%)
2 1364 bp 61.36 2.20 99.41
SCNpilot_cont_750_bf_scaffold_35836
Species: R_Alphaproteobacteria_66_14 (50%)
2 1171 bp 64.22 2.56 99.91
SCNpilot_cont_750_bf_scaffold_23676
Species: Microvirga lotononidis (50%)
2 1665 bp 63.36 1.00 91.71
SCNpilot_cont_750_bf_scaffold_29351
Species: Rhizobium leguminosarum (50%)
2 1385 bp 64.33 1.81 97.91
SCNpilot_cont_750_bf_scaffold_33889
Species: Bradyrhizobium diazoefficiens (50%)
2 1228 bp 59.28 2.85 68.89
SCNpilot_cont_750_bf_scaffold_36245
Species: Methylocella silvestris (50%)
2 1158 bp 61.49 3.02 81.09
SCNpilot_cont_750_bf_scaffold_31805
Species: Afipia sp. P52-10 (100%)
2 1293 bp 63.65 1.93 100.00
Displaying items 51-100 of 312 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.