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SCNPILOT_CONT_300_BF_Rhizobiales_61_16

SCNPILOT_CONT_750_BF_Rhizobiales_62_2
In projects: SCNPILOT_CONT_750_BF

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_cont_750_bf_UNK

Properties

Avg. coverage: 1.90 Longest contig: 3.93 Kbp Bin length: 428.04 Kbp GC content: 62.29 %
Contigs count: 312 Features count: 650 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 3 / 55 BSCG 4 / 51 MC: 1 ASCG 0 / 38
Displaying items 201-250 of 312 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_750_bf_scaffold_26949
Species: Bradyrhizobium sp. LTSP849 (50%)
2 1492 bp 64.34 3.69 97.12
SCNpilot_cont_750_bf_scaffold_32606
Species: Rhizobium tropici (50%)
2 1266 bp 54.27 1.18 76.54
SCNpilot_cont_750_bf_scaffold_35463
Species: Sulfuritalea hydrogenivorans (50%)
2 1182 bp 60.91 1.06 96.70
SCNpilot_cont_750_bf_scaffold_41600
Species: Nitrobacter sp. Nb-311A (50%)
2 1012 bp 64.03 2.96 99.01
SCNpilot_cont_750_bf_scaffold_38490
Species: Methylocella silvestris (50%)
2 1096 bp 62.14 2.51 91.15
SCNpilot_cont_750_bf_scaffold_32610
Species: Bosea sp. LC85 (50%)
2 1265 bp 61.19 1.19 89.64
SCNpilot_cont_750_bf_scaffold_40283
Species: RLO_Betaproteobacteria_68_20 (50%)
2 1046 bp 61.38 1.00 99.24
SCNpilot_cont_750_bf_scaffold_31940
Species: Acinetobacter sp. NIPH 284 (50%)
2 1288 bp 63.82 1.94 92.00
SCNpilot_cont_750_bf_scaffold_29751
Species: Rhodovulum sp. PH10 (50%)
2 1368 bp 62.13 1.10 97.81
SCNpilot_cont_750_bf_scaffold_30757
Species: Beijerinckia indica (50%)
2 1330 bp 64.14 2.26 87.97
SCNpilot_cont_750_bf_scaffold_30502
Species: Methylocella silvestris (50%)
2 1340 bp 65.52 3.73 98.73
SCNpilot_cont_750_bf_scaffold_34143
Species: Burkholderia sp. RPE67 (100%)
2 1220 bp 61.23 2.46 89.75
SCNpilot_cont_750_bf_scaffold_22586
Species: CG_Rhodof_04 (50%)
2 1735 bp 58.96 1.01 67.44
SCNpilot_cont_750_bf_scaffold_42034
Species: Methylocella silvestris (100%)
2 1002 bp 61.88 1.50 90.42
SCNpilot_cont_750_bf_scaffold_37337
Species: Bradyrhizobium sp. LTSP849 (50%)
2 1129 bp 62.18 1.33 85.83
SCNpilot_cont_750_bf_scaffold_41612
Species: R_Betaproteobacteria_63_19 (50%)
2 1012 bp 60.57 1.24 90.42
SCNpilot_cont_750_bf_scaffold_28172
Species: Methylocella silvestris (50%)
2 1434 bp 64.44 1.57 88.91
SCNpilot_cont_750_bf_scaffold_26708
Species: Actibacterium atlanticum (50%)
2 1503 bp 65.14 2.66 95.41
SCNpilot_cont_750_bf_scaffold_36132
Species: Methylocella silvestris (50%)
2 1162 bp 65.92 3.01 83.39
SCNpilot_cont_750_bf_scaffold_28685
Species: Methylobacterium nodulans (50%)
2 1411 bp 70.59 1.95 99.50
SCNpilot_cont_750_bf_scaffold_34151
Species: Microvirga aerilata (100%)
2 1220 bp 64.26 2.66 98.61
SCNpilot_cont_750_bf_scaffold_28176
Species: Herbaspirillum sp. CF444 (50%)
2 1433 bp 60.22 1.40 91.91
SCNpilot_cont_750_bf_scaffold_39416
Species: Rhodospirillaceae bacterium BRH_c57 (50%)
2 1070 bp 62.90 1.64 92.24
SCNpilot_cont_750_bf_scaffold_33531
Species: Rhizobium sp. CF080 (100%)
2 1239 bp 62.55 2.62 99.52
SCNpilot_cont_750_bf_scaffold_39165
Species: GWA2_Rokubacteria_70_23_curated (50%)
2 1077 bp 63.79 1.16 99.16
SCNpilot_cont_750_bf_scaffold_31447
Species: Methylocella silvestris (50%)
2 1305 bp 62.61 2.68 80.92
SCNpilot_cont_750_bf_scaffold_29258
Species: Beijerinckia indica (50%)
2 1388 bp 59.22 2.16 87.10
SCNpilot_cont_750_bf_scaffold_36145
Species: Skermanella aerolata (50%)
2 1161 bp 62.79 1.72 95.09
SCNpilot_cont_750_bf_scaffold_39937
Species: Nitratireductor pacificus (50%)
2 1056 bp 62.88 2.84 85.23
SCNpilot_cont_750_bf_scaffold_37099
Species: R_Betaproteobacteria_62_17 (50%)
2 1136 bp 58.54 1.76 95.60
SCNpilot_cont_750_bf_scaffold_37357
Species: Methylocystis sp. SC2 (50%)
2 1129 bp 65.63 2.66 91.14
SCNpilot_cont_750_bf_scaffold_34425
Species: Microvirga lotononidis (50%)
2 1212 bp 56.85 2.48 44.80
SCNpilot_cont_750_bf_scaffold_33292
Species: bacterium YEK0313 (100%)
2 1246 bp 64.93 2.41 90.77
SCNpilot_cont_750_bf_scaffold_36925
Species: Methylocella silvestris (50%)
2 1140 bp 63.07 2.19 99.74
SCNpilot_cont_750_bf_scaffold_31462
Species: Rhodopseudomonas palustris (50%)
2 1304 bp 63.88 1.15 80.29
SCNpilot_cont_750_bf_scaffold_26735
Species: Rhodovulum sp. PH10 (50%)
2 1502 bp 64.31 1.00 86.68
SCNpilot_cont_750_bf_scaffold_30536
Species: Vibrio furnissii (50%)
2 1339 bp 64.60 2.05 99.70
SCNpilot_cont_750_bf_scaffold_34692
Species: Bradyrhizobium sp. ORS 375 (50%)
2 1204 bp 61.63 1.25 82.97
SCNpilot_cont_750_bf_scaffold_39700
Species: Methylobacterium sp. 4-46 (50%)
2 1062 bp 63.56 1.88 82.77
SCNpilot_cont_750_bf_scaffold_33820
Species: Methylocella silvestris (50%)
2 1230 bp 66.50 1.02 95.61
SCNpilot_cont_750_bf_scaffold_38288
Species: Methylobacterium sp. 4-46 (50%)
2 1102 bp 66.42 1.00 99.36
SCNpilot_cont_750_bf_scaffold_30040
Species: Bradyrhizobium sp. LTSPM299 (50%)
2 1357 bp 59.84 5.34 96.83
SCNpilot_cont_750_bf_scaffold_35267
Species: bacterium YEK0313 (100%)
2 1188 bp 58.50 2.10 95.45
SCNpilot_cont_750_bf_scaffold_28220
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated (50%)
2 2050 bp 63.90 2.20 100.10
SCNpilot_cont_750_bf_scaffold_38037
Species: Methylocystis sp. SC2 (100%)
2 1109 bp 60.23 3.83 79.26
SCNpilot_cont_750_bf_scaffold_31229
Species: Methylobacterium populi (50%)
2 1313 bp 62.15 1.00 84.08
SCNpilot_cont_750_bf_scaffold_31741
Species: Acidovorax sp. CF316 (50%)
2 1295 bp 62.39 1.54 89.65
SCNpilot_cont_750_bf_scaffold_25318
Species: Rhizobium sp. AP16 (50%)
2 1572 bp 63.99 1.91 82.63
SCNpilot_cont_750_bf_scaffold_37648
Species: Beijerinckia indica (50%)
2 1120 bp 57.50 2.23 76.34
SCNpilot_cont_750_bf_scaffold_38045
Species: Methylobacterium extorquens (50%)
2 1109 bp 64.11 2.48 101.44
Displaying items 201-250 of 312 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.