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SCNPILOT_CONT_300_BF_Rhizobiales_61_16

SCNPILOT_CONT_750_BF_Rhizobiales_62_2
In projects: SCNPILOT_CONT_750_BF

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_cont_750_bf_UNK

Properties

Avg. coverage: 1.90 Longest contig: 3.93 Kbp Bin length: 428.04 Kbp GC content: 62.29 %
Contigs count: 312 Features count: 650 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 3 / 55 BSCG 4 / 51 MC: 1 ASCG 0 / 38
Displaying items 101-150 of 312 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_750_bf_scaffold_28287
Species: R_Betaproteobacteria_64_12 (50%)
2 1429 bp 60.95 2.97 90.06
SCNpilot_cont_750_bf_scaffold_34521
Species: Mesorhizobium sp. L2C066B000 (50%)
2 1209 bp 59.80 1.00 72.46
SCNpilot_cont_750_bf_scaffold_32737
Species: Afipia sp. 1NLS2 (100%)
2 1261 bp 60.59 2.78 84.46
SCNpilot_cont_750_bf_scaffold_34010
Species: R_NC10_66_22 (50%)
2 1224 bp 63.32 1.00 85.78
SCNpilot_cont_750_bf_scaffold_17896
Species: Chlamydomonas incerta (50%)
2 2126 bp 63.97 1.41 81.00
SCNpilot_cont_750_bf_scaffold_25134
Species: Methylobacterium populi (50%)
2 1582 bp 64.98 1.90 93.11
SCNpilot_cont_750_bf_scaffold_40414
Species: Rhodopseudomonas palustris (50%)
2 1043 bp 62.80 1.00 77.66
SCNpilot_cont_750_bf_scaffold_30889
Species: Beijerinckia indica (50%)
2 1326 bp 61.61 1.89 93.89
SCNpilot_cont_750_bf_scaffold_41227
Species: Methylocella silvestris (50%)
2 1022 bp 61.25 1.96 81.60
SCNpilot_cont_750_bf_scaffold_21670
Species: Bosea sp. LC85 (50%)
2 1801 bp 63.46 2.78 87.62
SCNpilot_cont_750_bf_scaffold_34788
Species: Methylocystis sp. SC2 (50%)
2 1200 bp 62.75 1.00 90.75
SCNpilot_cont_750_bf_scaffold_26580
Species: Burkholderia cepacia (50%)
2 1509 bp 58.78 1.33 67.79
SCNpilot_cont_750_bf_scaffold_27148
Species: Methylocella silvestris (50%)
2 1482 bp 64.04 1.69 92.92
SCNpilot_cont_750_bf_scaffold_30126
Species: Devosia sp. 17-2-E-8 (50%)
2 1354 bp 61.23 1.00 97.49
SCNpilot_cont_750_bf_scaffold_27663
Species: Methylocystis sp. SC2 (50%)
2 1459 bp 61.41 1.00 70.53
SCNpilot_cont_750_bf_scaffold_39034
Species: Aureimonas altamirensis (50%)
2 1080 bp 62.78 1.16 98.61
SCNpilot_cont_750_bf_scaffold_30642
Species: RBG_16_Betaproteobacteria_64_18_curated (50%)
2 1334 bp 61.54 1.31 94.90
SCNpilot_cont_750_bf_scaffold_27412
Species: Pandoraea pnomenusa (50%)
2 1470 bp 62.93 1.00 100.00
SCNpilot_cont_750_bf_scaffold_37989
Species: Nitratireductor pacificus (50%)
2 1110 bp 58.02 1.80 85.41
SCNpilot_cont_750_bf_scaffold_23966
Species: Beijerinckia indica (50%)
2 1649 bp 64.83 2.12 94.06
SCNpilot_cont_750_bf_scaffold_27158
Species: Inquilinus limosus (50%)
2 1482 bp 64.04 1.69 98.99
SCNpilot_cont_750_bf_scaffold_30648
Species: Beijerinckia indica (50%)
2 1334 bp 63.34 2.25 95.58
SCNpilot_cont_750_bf_scaffold_30910
Species: Beijerinckia indica (50%)
2 1325 bp 64.53 2.64 100.08
SCNpilot_cont_750_bf_scaffold_35367
Species: Methylobacterium sp. 4-46 (50%)
2 1184 bp 64.53 2.11 81.84
SCNpilot_cont_750_bf_scaffold_59068
Species: Bradyrhizobium sp. LTSP885 (50%)
2 1275 bp 64.71 2.75 99.29
SCNpilot_cont_750_bf_scaffold_37232
Species: R_Betaproteobacteria_65_24 (50%)
2 1132 bp 63.43 1.77 99.38
SCNpilot_cont_750_bf_scaffold_41249
Species: R_Betaproteobacteria_62_17 (50%)
2 1021 bp 61.70 1.00 97.26
SCNpilot_cont_750_bf_scaffold_30913
Species: Variovorax paradoxus (50%)
2 1324 bp 63.60 1.51 92.67
SCNpilot_cont_750_bf_scaffold_26348
Species: R_Phenylobacterium_69_31 (50%)
2 1521 bp 62.13 2.63 86.00
SCNpilot_cont_750_bf_scaffold_23980
Species: Bradyrhizobium sp. LTSP885 (50%)
2 1648 bp 58.31 1.52 80.46
SCNpilot_cont_750_bf_scaffold_33939
Species: Methylobacterium sp. 4-46 (50%)
2 1226 bp 53.83 2.45 81.24
SCNpilot_cont_750_bf_scaffold_26610
Species: Rhodopseudomonas palustris (50%)
2 1508 bp 56.17 2.49 93.90
SCNpilot_cont_750_bf_scaffold_30667
Species: Afipia sp. P52-10 (50%)
2 1334 bp 63.79 1.50 92.88
SCNpilot_cont_750_bf_scaffold_41517
Species: Methylocella silvestris (50%)
2 1014 bp 64.50 1.97 91.42
SCNpilot_cont_750_bf_scaffold_34053
Species: Mesorhizobium metallidurans (50%)
2 1223 bp 48.24 1.23 97.38
SCNpilot_cont_750_bf_scaffold_29152
Species: R_Alphaproteobacteria_66_14 (50%)
2 1392 bp 62.36 1.80 99.57
SCNpilot_cont_750_bf_scaffold_41264
Species: Rhizobium leguminosarum (50%)
2 1021 bp 63.86 1.47 99.31
SCNpilot_cont_750_bf_scaffold_41521
Species: Rhizobium nepotum (50%)
2 1014 bp 62.92 1.00 88.17
SCNpilot_cont_750_bf_scaffold_37761
Species: Bradyrhizobiaceae bacterium SG-6C (50%)
2 1117 bp 61.06 2.46 98.57
SCNpilot_cont_750_bf_scaffold_21966
Species: bacterium YEK0313 (50%)
2 1779 bp 62.96 2.25 85.33
SCNpilot_cont_750_bf_scaffold_33952
Species: GWA2_Rokubacteria_73_35_curated (50%)
2 1226 bp 58.08 1.00 90.78
SCNpilot_cont_750_bf_scaffold_26111
Species: Bordetella bronchiseptica (50%)
2 1533 bp 61.90 1.96 89.82
SCNpilot_cont_750_bf_scaffold_38671
Species: Microvirga lotononidis (50%)
2 1091 bp 65.26 2.06 98.72
SCNpilot_cont_750_bf_scaffold_41275
Species: R_Betaproteobacteria_62_17 (50%)
2 1020 bp 62.75 1.00 88.24
SCNpilot_cont_750_bf_scaffold_41791
Species: Komagataeibacter xylinus (50%)
2 1007 bp 59.29 1.99 89.37
SCNpilot_cont_750_bf_scaffold_41280 2 1020 bp 62.25 1.96 93.82
SCNpilot_cont_750_bf_scaffold_31619
Species: Azoarcus sp. BH72 (50%)
2 1299 bp 57.58 1.92 42.49
SCNpilot_cont_750_bf_scaffold_39084
Species: Bordetella sp. 8-296-03 (50%)
2 1079 bp 60.61 1.16 100.09
SCNpilot_cont_750_bf_scaffold_33459
Species: RLO_Betaproteobacteria_65_14 (50%)
2 1241 bp 61.89 1.00 95.73
SCNpilot_cont_750_bf_scaffold_26130
Species: Burkholderia sp. CCGE1003 (50%)
2 1532 bp 66.91 3.92 86.95
Displaying items 101-150 of 312 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.