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SCNpilot_cont_750_p_scaffold_4302

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_4302_1
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..305
DNA (303bp) protein (101aa)
ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI000366239B
ABC transporter permease {ECO:0000313|EMBL:KJC57345.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
transport system permease; K02015 iron complex transport system permease protein
SCNpilot_cont_750_p_scaffold_4302_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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302..1081
DNA (780bp) protein (260aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D894EA
ABC transporter {ECO:0000313|EMBL:KJC57344.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_750_p_scaffold_4302_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1093..2079)
DNA (987bp) protein (329aa)
Aminotransferase {ECO:0000313|EMBL:ABJ06182.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABJ06182.1};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Aminotransferase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) PF2_RHOP5">RepID=Q07PF2_RHOP5
class I and II aminotransferase; K02225 cobalamin biosynthetic protein CobC
SCNpilot_cont_750_p_scaffold_4302_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2107..2982
DNA (876bp) protein (292aa)
Periplasmic binding protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J265_RHOP2
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABD05445.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_p_scaffold_4302_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2984..3964
DNA (981bp) protein (327aa)
cobalamin biosynthesis protein CobD; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
Cobalamin biosynthesis protein CobD n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210A7_RHOPB
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_750_p_scaffold_4302_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4117..5589)
DNA (1473bp) protein (491aa)
cobyric acid synthase; K02232 adenosylcobyric acid synthase [EC:6.3.5.10] rbh
Cobyric acid synthase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J263_RHOP2
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_p_scaffold_4302_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5786..6412)
DNA (627bp) protein (209aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ABD89281.1}; EC=2.5.1.17 {ECO:0000313|EMBL:ABD89281.1};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210A5_RHOPB
SCNpilot_cont_750_p_scaffold_4302_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6409..6966)
DNA (558bp) protein (186aa)
cobalbumin biosynthesis enzyme; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
Adenosylcobinamide kinase {ECO:0000313|EMBL:ABD89282.1}; EC=2.7.1.156 {ECO:0000313|EMBL:ABD89282.1};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Adenosylcobinamide kinase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210A4_RHOPB
SCNpilot_cont_750_p_scaffold_4302_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7320..8375
DNA (1056bp) protein (352aa)
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18)
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003490837
SCNpilot_cont_750_p_scaffold_4302_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8376..9140
DNA (765bp) protein (255aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
cobalamin (5`-phosphate) synthase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A807F
SCNpilot_cont_750_p_scaffold_4302_11
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9256..9801)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MPV3_9RHIZ
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:ETR76254.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_4302_12
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9791..10744)
DNA (954bp) protein (318aa)
Beta-lactamase-like protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WV40_9BRAD
beta-lactamase-like
Beta-lactamase-like protein {ECO:0000313|EMBL:EAQ36181.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Displaying 12 items

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