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SCNpilot_cont_750_p_scaffold_5216

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_5216_1
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..2390
DNA (2388bp) protein (796aa)
DNA mismatch repair protein MutS n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YKT1_9BRAD
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
SCNpilot_cont_750_p_scaffold_5216_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2391..3191)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TIM7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC61470.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_5216_3
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3279..3788)
DNA (510bp) protein (170aa)
peroxiredoxin n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003796D3D
Peroxiredoxin {ECO:0000313|EMBL:KJC53941.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_5216_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3863..4648)
DNA (786bp) protein (262aa)
ABC transporter ATP-binding protein; K15555 sulfonate transport system ATP-binding protein [EC:3.6.3.-]
Sulfonate transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IGT6_9BRAD
Sulfonate transport system ATP-binding protein {ECO:0000313|EMBL:ERF82925.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_750_p_scaffold_5216_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4648..5496)
DNA (849bp) protein (283aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QIP9_RHOPT
ABC transporter permease {ECO:0000313|EMBL:KJC51742.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ABC transporter inner membrane protein; K15554 sulfonate transport system permease protein
SCNpilot_cont_750_p_scaffold_5216_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5590..6561)
DNA (972bp) protein (324aa)
Aliphatic sulfonates family ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GZL1_9BRAD
Sulfonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC61467.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter substrate-binding protein; K15553 sulfonate transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_5216_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6815..9418
DNA (2604bp) protein (868aa)
[protein-PII] uridylyltransferase; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59]
PII uridylyl-transferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000380078A
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_750_p_scaffold_5216_8
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9440..9967)
DNA (528bp) protein (176aa)
ogt; methylated-DNA-[protein]-cysteine S-methyltransferase (EC:2.1.1.63); K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VY0_BRADU
Putative methylated-DNA-protein-cysteine S-methyltransferase {ECO:0000313|EMBL:KGJ65337.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_750_p_scaffold_5216_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10035..10391
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P476_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig172, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49852.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein; K08987 putative membrane protein
SCNpilot_cont_750_p_scaffold_5216_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10554..11777
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07V11_RHOP5
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ45583.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_5216_11
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12093..14375
DNA (2283bp) protein (761aa)
penicillin-binding protein 1A n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030EB1F2
Penicillin-binding protein {ECO:0000313|EMBL:KJC51617.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
penicillin-binding protein 1A rbh
SCNpilot_cont_750_p_scaffold_5216_12
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14676..15431)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWE2_NITWN
hypothetical protein; K07043
Uncharacterized protein {ECO:0000313|EMBL:ABA03399.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_p_scaffold_5216_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15732..16175)
DNA (444bp) protein (148aa)
esterase n=1 Tax=Afipia birgiae RepID=UPI000315839E
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:EKS37356.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying 13 items

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