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SCNpilot_expt_1000_bf_scaffold_5589

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5589_1
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(158..2263)
DNA (2106bp) protein (702aa)
Strain SA-120 Contig507, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01254.1}; Flags: Fragment;; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
SCNpilot_expt_1000_bf_scaffold_5589_2
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2542..3036
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCB1_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ69927.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_expt_1000_bf_scaffold_5589_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3062..4357
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI000305A535 rbh
peptidase M19, renal dipeptidase rbh
Peptidase M19, renal dipeptidase {ECO:0000313|EMBL:ABQ69928.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_expt_1000_bf_scaffold_5589_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4466..5449
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002EA8A68
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABQ69929.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_expt_1000_bf_scaffold_5589_5
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5691..6275
DNA (585bp) protein (195aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJA9_CAUST
Uncharacterized protein {ECO:0000313|EMBL:AJA09088.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_1000_bf_scaffold_5589_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6256..7278
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4R1E0_9CAUL
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:AJA09087.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
anti-FecI sigma factor FecR; K07165 transmembrane sensor
SCNpilot_expt_1000_bf_scaffold_5589_7
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7376..10609
DNA (3234bp) protein (1078aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USH7_9SPHN rbh
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:AJA09086.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
TonB-dependent receptor rbh
SCNpilot_expt_1000_bf_scaffold_5589_8
unknown

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10777..11238
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5589_9
unknown

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comp(11250..11678)
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5589_10
unknown

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comp(11754..11915)
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 10 items

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