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SCNpilot_expt_1000_bf_scaffold_5823

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5823_1
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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1..369
DNA (369bp) protein (123aa)
cation-transporting ATPase n=1 Tax=Nocardiopsis halotolerans RepID=UPI00034BCBEB
ATPase P
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ADH67220.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
SCNpilot_expt_1000_bf_scaffold_5823_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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369..686
DNA (318bp) protein (106aa)
Lead cadmium zinc and mercury transporting ATPase {ECO:0000313|EMBL:EHN13023.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EHN13023.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ctpG; Cadmium-translocating P-type ATPase (EC:3.6.3.3)
cation-transporting ATPase n=1 Tax=Streptomyces sp. CNS335 RepID=UPI000381C1E2
SCNpilot_expt_1000_bf_scaffold_5823_3
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(631..825)
DNA (195bp) protein (65aa)
transglycosylase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7A8DF
Transglycosylase {ECO:0000313|EMBL:EYT65887.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5823_4
Colletotrichum higginsianum, Colletotrichum, Glomerellales, Hypocreomycetidae, Ascomycota, Fungi

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1049..1438
DNA (390bp) protein (130aa)
Glutathione-dependent formaldehyde-activating enzyme (Fragment) n=1 Tax=Colletotrichum higginsianum (strain IMI 349063) RepID=H1VB86_COLHI
Glutathione-dependent formaldehyde-activating enzyme {ECO:0000313|EMBL:CCF37489.1}; Flags: Fragment;; TaxID=759273 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum.;" source="Colletotrichum higginsianum (strain IMI 349063) (Crucifer anthracnose; fungus).;"
glutathione-dependent formaldehyde-activating protein
SCNpilot_expt_1000_bf_scaffold_5823_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1611..2267
DNA (657bp) protein (219aa)
peroxidase (EC:1.11.1.7) rbh
Peroxidase {ECO:0000313|EMBL:ADB52054.1}; EC=1.11.1.7 {ECO:0000313|EMBL:ADB52054.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Peroxidase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F191_CONWI rbh
SCNpilot_expt_1000_bf_scaffold_5823_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2302..4125
DNA (1824bp) protein (608aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|SAAS:SAAS00014038}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00276386};; EC=1.8.1.2 {ECO:0000256|SAAS:SAAS00013953};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
sulfite reductase (NADPH) flavoprotein, alpha chain (EC:1.14.13.39); K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Patulibacter medicamentivorans RepID=H0E6V6_9ACTN
SCNpilot_expt_1000_bf_scaffold_5823_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4131..5894
DNA (1764bp) protein (588aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000256|HAMAP-Rule:MF_01540};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
sulfite reductase subunit beta (EC:1.8.7.1); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V215_9BRAD
SCNpilot_expt_1000_bf_scaffold_5823_8
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5925..6464)
DNA (540bp) protein (180aa)
dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase n=1 Tax=Humibacter albus RepID=UPI0003B4BE7D
Dioxygenase {ECO:0000313|EMBL:EZP28017.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_expt_1000_bf_scaffold_5823_9
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7123..7503
DNA (381bp) protein (127aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
Uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27]
uracil-DNA glycosylase n=1 Tax=Sciscionella marina RepID=UPI0003659DFA
Displaying 9 items

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