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SCNpilot_expt_1000_bf_scaffold_7690

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7690_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2..640)
DNA (639bp) protein (213aa)
NUDIX hydrolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F010_CONWI
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADB49986.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_7690_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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942..1547
DNA (606bp) protein (202aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2S6_CONWI
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB54207.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_7690_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1544..2845
DNA (1302bp) protein (434aa)
Protein kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2S7_CONWI
protein kinase
Protein kinase {ECO:0000313|EMBL:ADB54208.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_7690_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2913..3566)
DNA (654bp) protein (218aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H1_CONWI rbh
LuxR family transcriptional regulator rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB52134.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_7690_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3557..5197)
DNA (1641bp) protein (547aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H2_CONWI rbh
integral membrane sensor signal transduction histidine kinase rbh
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADB52135.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_7690_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5494..7815
DNA (2322bp) protein (774aa)
Anti-sigma factor antagonist n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZ41_CONWI rbh
anti-sigma-factor antagonist rbh
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_7690_7
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8035..8637
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI00035D995D
MarR family transcriptional regulator; K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin
MarR family transcriptional regulator {ECO:0000313|EMBL:KEI44592.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
SCNpilot_expt_1000_bf_scaffold_7690_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8634..10202
DNA (1569bp) protein (523aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5P3_CONWI rbh
EmrB/QacA subfamily drug resistance transporter rbh
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADB52592.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_7690_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10257..12077
DNA (1821bp) protein (607aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4I8_CONWI
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD {ECO:0000313|EMBL:ADB52445.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_7690_10
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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12191..13633
DNA (1443bp) protein (481aa)
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-] rbh
cytochrome BD ubiquinol oxidase subunit I n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003641B52
Cytochrome bd ubiquinol oxidase (Subunit I) {ECO:0000313|EMBL:ACZ87412.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_expt_1000_bf_scaffold_7690_11
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13652..14776
DNA (1125bp) protein (375aa)
cydB; cytochrome bd-I oxidase subunit II (EC:1.10.3.-); K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
Cytochrome bd-I oxidase subunit II {ECO:0000313|EMBL:BAK35480.1}; EC=1.10.3.- {ECO:0000313|EMBL:BAK35480.1};; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
cytochrome C oxidase assembly protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036A2D67
SCNpilot_expt_1000_bf_scaffold_7690_12
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15574..16404
DNA (831bp) protein (277aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8F1V7_STRRM
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD {ECO:0000313|EMBL:ELQ85359.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
cysteine ABC transporter permease/ATP-binding protein CydD; K16013 ATP-binding cassette, subfamily C, bacterial CydD
SCNpilot_expt_1000_bf_scaffold_7690_13
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16401..18107
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI000365A7A1
cysteine ABC transporter permease/ATP-binding protein CydD; K16014 ATP-binding cassette, subfamily C, bacterial CydCD
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD {ECO:0000313|EMBL:AEM88463.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
SCNpilot_expt_1000_bf_scaffold_7690_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18076..18762)
DNA (687bp) protein (229aa)
GAF sensor signal transduction histidine kinase (EC:2.7.13.3)
GAF sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADB49725.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ADB49725.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
GAF sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEQ1_CONWI
Displaying 14 items

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