name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_691_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(95..589)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AD3B4
Sphingomonas taxi strain 30a NODE_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26409.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
transcription elongation factor
|
|
SCNpilot_expt_300_bf_scaffold_691_2
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(627..1268)
|
cell wall hydrolase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD046
Cell wall hydrolase, SleB {ECO:0000313|EMBL:EAT08994.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
cell wall hydrolase SleB
|
|
SCNpilot_expt_300_bf_scaffold_691_3
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1430..1759)
|
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4FC82
Uncharacterized protein {ECO:0000313|EMBL:KHA64977.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_691_4
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1756..2211)
|
Uncharacterized 1 domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WY79_9SPHN
Thioesterase {ECO:0000313|EMBL:KHA65004.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
thioesterase
|
|
SCNpilot_expt_300_bf_scaffold_691_5
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2198..2668)
|
nitrogen regulatory protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3C176
PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:GAM01008.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
|
|
SCNpilot_expt_300_bf_scaffold_691_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2686..3270)
|
Ribosomal subunit interface protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WY81_9SPHN
rbh
Sphingomonas taxi strain 30a NODE_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26443.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
30S ribosomal protein S30
|
|
SCNpilot_expt_300_bf_scaffold_691_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3326..4018)
|
DNA polymerase III, epsilon subunit n=1 Tax=Sphingomonas sp. S17 RepID=F3WY82_9SPHN
rbh
DNA polymerase III subunit epsilon
rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:AIT07387.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sph
|
|
SCNpilot_expt_300_bf_scaffold_691_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4026..4619)
|
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1549858 species="Bacteria; P
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000360036C
dephospho-CoA kinase
|
|
SCNpilot_expt_300_bf_scaffold_691_9
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4616..5428)
|
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Shikimate dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG67_9SPHN
rbh
shikimate 5-dehydrogenase
|
|
SCNpilot_expt_300_bf_scaffold_691_10
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5425..6015)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003773785
rbh
Maf-like protein SP5_043_00400 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sph
septum formation protein Maf
|
|
SCNpilot_expt_300_bf_scaffold_691_11
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6012..6842)
|
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
PEP synthetase regulatory protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003725BDE
phosphate kinase
|
|
SCNpilot_expt_300_bf_scaffold_691_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7147..8163
|
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
uroporphyrinogen decarboxylase n=1 Tax=Sphingomonas melonis RepID=UPI00037BFDB7
rbh
uroporphyrinogen decarboxylase
rbh
|
|
SCNpilot_expt_300_bf_scaffold_691_13
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8188..8646
|
membrane protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B58E72
Uncharacterized protein {ECO:0000313|EMBL:GAM01000.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
membrane protein
|
|
SCNpilot_expt_300_bf_scaffold_691_14
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8810..10066
|
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=392499 specie
transcription termination factor Rho n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5DCF5
rbh
rho; transcription termination factor Rho
|
|
SCNpilot_expt_300_bf_scaffold_691_15
unknown
|
Not on your lists |
comp(10060..10827)
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_691_16
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11006..11614
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003689EA9
rbh
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" s
cell envelope biogenesis protein LolA
|
|
SCNpilot_expt_300_bf_scaffold_691_17
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11795..12844)
|
GTP cyclohydrolase II {ECO:0000256|SAAS:SAAS00129532}; EC=3.5.4.25 {ECO:0000256|SAAS:SAAS00129532};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
GTP cyclohydrolase II n=1 Tax=Sphingomonas sp. S17 RepID=F3X097_9SPHN
rbh
GTP cyclohydrolase
|
|
SCNpilot_expt_300_bf_scaffold_691_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12841..13623)
|
exodeoxyribonuclease III n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B484D6
rbh
exodeoxyribonuclease III
Exodeoxyribonuclease III {ECO:0000313|EMBL:AIT07379.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
|
|
SCNpilot_expt_300_bf_scaffold_691_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13663..14325)
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000368683B
rbh
haloacid dehalogenase
Haloacid dehalogenase {ECO:0000313|EMBL:AIT07409.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas tax
|
|
SCNpilot_expt_300_bf_scaffold_691_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14322..14996)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C3419
rbh
alanine racemase
Alanine racemase {ECO:0000313|EMBL:AJP73616.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC
|
|
SCNpilot_expt_300_bf_scaffold_691_21
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15019..15528
|
thiamine monophosphate synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3DB39
thiamine monophosphate synthase
Thiamine monophosphate synthase {ECO:0000313|EMBL:AJP73615.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
|
|
SCNpilot_expt_300_bf_scaffold_691_22
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15544..16242)
|
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0A1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHA65009.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_691_23
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16478..16912
|
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B63012
Uncharacterized protein {ECO:0000313|EMBL:KHA65008.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_691_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16955..19243
|
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1549858 species="Bacteria; Proteo
leucyl-tRNA synthetase n=1 Tax=Sphingomonas melonis RepID=UPI0003611194
leucyl-tRNA synthetase
|
|
SCNpilot_expt_300_bf_scaffold_691_25
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19182..19427
|
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=104605 species="Bacteria; Proteob
leucyl-tRNA synthetase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC5F1
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_300_bf_scaffold_691_24].
leucyl-tRNA synthetase
|
|
SCNpilot_expt_300_bf_scaffold_691_26
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19424..19927
|
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9C20
Uncharacterized protein {ECO:0000313|EMBL:EZP49214.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
secreted (periplasmic)-like protein
|
|
SCNpilot_expt_300_bf_scaffold_691_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19924..20946
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000363CB9A
rbh
DNA polymerase III subunit delta
DNA polymerase III subunit delta {ECO:0000313|EMBL:AIT07402.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphin
|
|
SCNpilot_expt_300_bf_scaffold_691_28
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20951..21838)
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000377B99D
rbh
Chromosome partitioning protein ParB {ECO:0000313|EMBL:KHA64990.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sp
chromosome partitioning protein ParB
rbh
|
|
SCNpilot_expt_300_bf_scaffold_691_29
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21835..22617)
|
chromosome partitioning protein ParA n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B77F40
rbh
Sphingomonas taxi strain 30a NODE_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26425.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
chromosome partitioning protein ParA
rbh
|
|
SCNpilot_expt_300_bf_scaffold_691_30
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22614..23228)
|
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
16S rRNA methyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI000263160E
gidB; putative S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division
|