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SCNpilot_expt_300_bf_scaffold_1150_6

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(3386..3721)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus thioparus RepID=UPI0003695264 similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 111.0
  • Bit_score: 224
  • Evalue 4.60e-56
30S ribosomal protein S30P / sigma 54 modulation protein; K05808 putative sigma-54 modulation protein Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 113.0
  • Bit_score: 215
  • Evalue 3.00e-53
30S ribosomal protein S30 similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 111.0
  • Bit_score: 209
  • Evalue 4.30e-52

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGAATTTGACGATTTCCGGTCATCATCTGGAAGTGACCCCAGCCATCCGCGACTACGTTTCCGAGAAACTCGACCGCGTCAAACGCCATTTCGACCATGTCATCAACGTGACGGTCATCGTGCAGGTGGAAAAACTGGTGCACAAGGTGGAAGCCACGCTGCATGTGAAAGGCCATGACTTCCATGCCCACAGCGAGGACGGCAACATGTACGCCGCAATCGACCTTCTGGCGGACAAACTGGATCGCCAGATCGTGAAGCACAAGGAAAAAACCTCGGACGTCCATCAAGGCGGTGGCGGACTGAAGCATCAACCGACCGAAAGCCCGGCCTGA
PROTEIN sequence
Length: 112
MNLTISGHHLEVTPAIRDYVSEKLDRVKRHFDHVINVTVIVQVEKLVHKVEATLHVKGHDFHAHSEDGNMYAAIDLLADKLDRQIVKHKEKTSDVHQGGGGLKHQPTESPA*