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SCNpilot_expt_300_bf_scaffold_1150

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1150_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181..744)
DNA (564bp) protein (188aa)
hypothetical protein; K00805 heptaprenyl diphosphate synthase [EC:2.5.1.30] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
heptaprenyl diphosphate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FF002
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1150_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(725..1090)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E1491
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1150_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1130..1867)
DNA (738bp) protein (246aa)
glmZ(sRNA)-inactivating NTPase n=1 Tax=Thiobacillus thioparus RepID=UPI0003628061
hypothetical protein; K06958 UPF0042 nucleotide-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1150_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1868..2821)
DNA (954bp) protein (318aa)
HPr kinase/phosphorylase (EC:2.7.1.-); K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
HPr kinase/phosphorylase (EC:2.7.1.-)
HPr kinase n=1 Tax=Thiobacillus thioparus RepID=UPI000382AB09 rbh
SCNpilot_expt_300_bf_scaffold_1150_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2838..3329)
DNA (492bp) protein (164aa)
PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=GWE1_Thiobacillus_62_9_curated
PTS sugar transporter subunit IIA n=1 Tax=Thiobacillus thioparus RepID=UPI0003735227
PTS IIA-like nitrogen-regulatory protein PtsN
SCNpilot_expt_300_bf_scaffold_1150_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3386..3721)
DNA (336bp) protein (112aa)
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus thioparus RepID=UPI0003695264
30S ribosomal protein S30P / sigma 54 modulation protein; K05808 putative sigma-54 modulation protein Tax=GWE1_Thiobacillus_62_9_curated
30S ribosomal protein S30
SCNpilot_expt_300_bf_scaffold_1150_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3879..5312)
DNA (1434bp) protein (478aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor Tax=GWE1_Thiobacillus_62_9_curated
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus thioparus RepID=UPI0003749A25 rbh
SCNpilot_expt_300_bf_scaffold_1150_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5385..6107)
DNA (723bp) protein (241aa)
ATPase component ABC-type transport system; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=GWE1_Thiobacillus_62_9_curated
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00037E1C9A rbh
ABC transporter ATPase
SCNpilot_expt_300_bf_scaffold_1150_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6104..6673)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037225EE rbh
OstA-like family protein; K09774 lipopolysaccharide export system protein LptA Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OstA-like family protein
SCNpilot_expt_300_bf_scaffold_1150_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6645..7220)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003818FED rbh
hypothetical protein; K11719 lipopolysaccharide export system protein LptC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1150_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7267..7794)
DNA (528bp) protein (176aa)
phosphatase KdsC; K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI0003624EB3 rbh
phosphatase kdsC
SCNpilot_expt_300_bf_scaffold_1150_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7794..8780)
DNA (987bp) protein (329aa)
capsule expression protein KpsF/GutQ; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
KpsF/GutQ family protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374B9DE rbh
capsule expression protein KpsF/GutQ
SCNpilot_expt_300_bf_scaffold_1150_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8837..10807
DNA (1971bp) protein (657aa)
potassium transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00036212F3 rbh
antiporter-2, CPA2 family monovalent cation/proton antiporter
Monovalent cation:H+ antiporter-2, CPA2 family {ECO:0000313|EMBL:AAZ96492.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilace
SCNpilot_expt_300_bf_scaffold_1150_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10862..11509)
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLC2_THIDA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96493.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_expt_300_bf_scaffold_1150_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11776..13254
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003678521
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1150_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13438..14172)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371D5CF
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1150_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14169..14618)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A0758
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1150_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14611..15213)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000363B157 rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1150_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15210..16709)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037ACE87 rbh
monoheme cytochrome SoxX Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
monoheme cytochrome SoxX
SCNpilot_expt_300_bf_scaffold_1150_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16709..17914)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003720BAF rbh
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=GWE1_Thiobacillus_62_9_curated
type IV pilus assembly protein PilC
SCNpilot_expt_300_bf_scaffold_1150_21
unknown

Not on your lists

comp(17917..18495)
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1150_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18498..18995)
DNA (498bp) protein (166aa)
secretion system protein E n=1 Tax=Thiobacillus thioparus RepID=UPI0003639D30
ATPase, type IV pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=GWE1_Thiobacillus_62_9_curated
ATPase, type IV pilus assembly protein PilB
SCNpilot_expt_300_bf_scaffold_1150_23
unknown

Not on your lists

19458..20276
DNA (819bp) protein (273aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1150_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20143..20709)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A3632
TPR repeat-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TPR repeat-containing protein
SCNpilot_expt_300_bf_scaffold_1150_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21318..22937)
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000373DDCA rbh
putative Type II secretory pathway component PulD; K02453 general secretion pathway protein D Tax=GWE1_Thiobacillus_62_9_curated
Type II secretory pathway component PulD
SCNpilot_expt_300_bf_scaffold_1150_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22940..24250)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035CA735 rbh
ATPase, Type II secretory pathway component Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ATPase, Type II secretory pathway component
SCNpilot_expt_300_bf_scaffold_1150_27
unknown

Not on your lists

24305..24481
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1150_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24517..25947)
DNA (1431bp) protein (477aa)
Fis family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI000381D46A rbh
two component Fis family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Fis family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1150_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26146..27834)
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E1B42 rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1150_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27913..28731)
DNA (819bp) protein (273aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
alanyl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00035F6BF5
Displaying items 1-30 of 40 in total

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