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SCNpilot_expt_500_bf_scaffold_5880

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5880_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..127
DNA (126bp) protein (42aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl endopeptidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUV6_9GAMM
Prolyl endopeptidase {ECO:0000313|EMBL:EIL90997.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_expt_500_bf_scaffold_5880_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

228..893
DNA (666bp) protein (222aa)
Putative esterase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUU3_9GAMM rbh
putative esterase rbh
Putative esterase {ECO:0000313|EMBL:AGG87297.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_5880_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

958..2010
DNA (1053bp) protein (351aa)
Histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHJ0_9GAMM rbh
Histidine kinase rbh
Histidine kinase {ECO:0000313|EMBL:AGG87296.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_5880_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2010..2714
DNA (705bp) protein (235aa)
Response regulator of the LytR/AlgR family n=1 Tax=Rhodanobacter denitrificans RepID=M4NA61_9GAMM rbh
response regulator of the LytR/AlgR family rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_5880_5
unknown

Not on your lists

3115..3231
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5880_6
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3297..3812)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037868EA
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_expt_500_bf_scaffold_5880_7

Not on your lists

comp(4371..4616)
DNA (246bp) protein (82aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B7VD37_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAS02541.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5880_8
Pseudoalteromonas tunicata, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4820..5065)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WGR6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR28379.1}; TaxID=87626 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas tunicata D2.;"
SCNpilot_expt_500_bf_scaffold_5880_9
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5090..5476)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F923_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDM68302.1}; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella sp. PE36.;"
SCNpilot_expt_500_bf_scaffold_5880_10
unknown

Not on your lists

comp(5545..5853)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5880_11
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5923..6279)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Vibrio parahaemolyticus VPCR-2010 RepID=T5JII1_VIBPH
Tax=GWC2_Ignavibacteria_rel_36_12_curated
SCNpilot_expt_500_bf_scaffold_5880_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6795..7082)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WJE5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99586.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_expt_500_bf_scaffold_5880_13
unknown

Not on your lists

7163..7288
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5880_14
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7413..7832)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248DC94
Uncharacterized protein {ECO:0000313|EMBL:KEQ27875.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5880_15
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10183..10686)
DNA (504bp) protein (168aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM51416.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
SCNpilot_expt_500_bf_scaffold_5880_16
Acinetobacter sp. ANC 3789, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12391..12600)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Acinetobacter lwoffii RepID=UPI0002624888
Uncharacterized protein {ECO:0000313|EMBL:ENU80122.1}; TaxID=1217714 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3789.;"
SCNpilot_expt_500_bf_scaffold_5880_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12798..13766
DNA (969bp) protein (323aa)
Integron integrase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W882_9GAMM rbh
Integron integrase {ECO:0000313|EMBL:EIL95673.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
integron integrase
SCNpilot_expt_500_bf_scaffold_5880_18
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14059..14376
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2G259_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AJD49435.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5880_19
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14373..14810
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2HL31_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AJD49436.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5880_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14837..20167)
DNA (5331bp) protein (1777aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGY4_9GAMM
cellobiose phosphorylase
Cellobiose phosphorylase {ECO:0000313|EMBL:AGG90923.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_5880_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20164..20760)
DNA (597bp) protein (199aa)
Glycosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP8_9GAMM
Glycosyltransferase {ECO:0000313|EMBL:EIL89189.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cellobiose phosphorylase
SCNpilot_expt_500_bf_scaffold_5880_22
unknown

Not on your lists

21720..21914
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5880_23
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

22297..22635
DNA (339bp) protein (113aa)
Tax=RBG_13_Spirochaetes_68_11_curated
SCNpilot_expt_500_bf_scaffold_5880_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23321..23785
DNA (465bp) protein (155aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLI1_9GAMM
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGG90922.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_5880_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23849..24082)
DNA (234bp) protein (78aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBZ8_9GAMM
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EIL96989.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
SCNpilot_expt_500_bf_scaffold_5880_26
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

24684..26510
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Thauera aminoaromatica S2 RepID=N6YP60_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:KIJ70768.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5880_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26381..26746)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WGY1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90920.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_5880_28
unknown

Not on your lists

26748..27566
DNA (819bp) protein (273aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5880_29
unknown

Not on your lists

comp(27673..27945)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5880_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28071..28853
DNA (783bp) protein (261aa)
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ47_9GAMM
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AGG90919.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 32 in total

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