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SCNpilot_expt_500_bf_scaffold_4947_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 3..305

Top 3 Functional Annotations

Value Algorithm Source
TolC family type I secretion outer membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3A8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 100.0
  • Bit_score: 164
  • Evalue 6.70e-38
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EIL93949.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 100.0
  • Bit_score: 164
  • Evalue 9.40e-38
type I secretion outer membrane protein, TolC family similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 100.0
  • Bit_score: 163
  • Evalue 4.70e-38

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
CGCCAGGTGATCCAGAACACGCTCAACTACTACCGCTCGGTGCTCGCCGGCATTTCGCAGGTGGAGTCGGGCAAGGCCTCGGTGGAGTCCGGCCAGAAGGCGCTGGAAGCCACCCGTGCGGGCTTCGAGGTCGGCACGCAGACCTTCACCGACGTGCTGCTGGCGATCCAGACCCTGACCCAGTCCGAAAGCGCCTATTCGCAGGCGCGCCACCAGTTCATCCTGAACAAGCTGCTGTTGCAGCAGGCCGCCGGCACGGCCGACTTCAAGGACATTCAGGGCATCAACGCTCTGCTGCAGTGA
PROTEIN sequence
Length: 101
RQVIQNTLNYYRSVLAGISQVESGKASVESGQKALEATRAGFEVGTQTFTDVLLAIQTLTQSESAYSQARHQFILNKLLLQQAAGTADFKDIQGINALLQ*