ggKbase home page

SCNpilot_expt_500_bf_scaffold_4947_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(286..1467)

Top 3 Functional Annotations

Value Algorithm Source
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 407.0
  • Bit_score: 523
  • Evalue 1.70e-145
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EIL97643.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 407.0
  • Bit_score: 523
  • Evalue 2.40e-145
3-deoxy-D-manno-octulosonic-acid transferase similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 315.0
  • Bit_score: 520
  • Evalue 3.50e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGTTCCTGGTCACGCCGGTGCTGGTGCTGCGCCTGCTGGTGCGGGGCTTGCGCTCGCCGCCGCACCACCACCGGCGCTGGCTGGAGCGCTTCGGCTCGTTCGACGCGCCCGGCTTCAGCGGCAGCCTGTGGATTCACGCGGTATCGGTGGGCGAGGTCAACGCCGCCGAGCCGCTGGTCAAGGCACTGCAGCGCAGCTACGCCCACGCGCCGCTGGTGGTCAGCACGGTCACCCCCACCGGCGCCGCGCGCGTGCAGCAGCTGTTCGGCGACAGCGTGTTCCACGTGTACTTGCCCTACGACCTGCCGTTCGCGGTGCGCCGCTTCATGAAGCGCGTGCGGCCGCGTCTGGCGGTGATCGTGGAAACCGAGATCTGGCCCAACCTCTACTTCGCCTGCCGCCGCCGCGGCATCCCGCTGATGATCGTCAATGCACGATTGTCCGAGCGCTCGATGCGCGGCTACAAGCCGCTGCGTCCGCTGATCGCCTCGGCGCTGCGCTGCGTGAGCGTGATCGCCGCACAGTCGCGCACCGATGCTGCGCGCTATCGCCTCCTGGGCGCCGATCCGCAGTCGGTGCTGGTCAGCGGCAACATGAAGTTCGACGTGCCGATCCCGGACGGCGCGGTGGCGGCCGGCGCCGCGATGCGCGCGCACTGGGGGCCCCGGCGGCCGGTGTGGATGGCGGCCAGCACGCACGACGGCGAGGAACTGGCGGTGCTGGAGGCGCATCTGAAAGTGCTGCAGCGCCTGCCCGATGCACTGCTGCTGCTGGCGCCGCGCCACCCCGAGCGTTTCCGGCTGGTGGAGCACACCGTGCGCAGCCTCGGTTTCACGGTCGCCACGCGCAGCCTGGAAGGCGTGCCGGCGACCGCGCATCAGGTCTTCGTGATCGACGCCATGGGGCACGGTGCCGGTGCTGGTGGGGCCGCACACCTTCAATTCGGAAGAGATCATCCGCAGCCTGATCGAGGACGGCGGCGCCGAGCGCGTGGCTGCCGCCGAGCAACTCGGCCCGCACGTGCTGCGGCTGCTGCTCGACGCGCCGCGCCGCGGACAGATGGGCGAGGCGGCGCGACAGGTATTCGAGCGCGAGCGCGGGGCAGTGCGGCGCGTCATGCAGCTGGTCGACGCGCTGCTGCAGGAGTAGGCGGTCAGCGCCTCACTGCAGCAGAGCGTTGA
PROTEIN sequence
Length: 394
MFLVTPVLVLRLLVRGLRSPPHHHRRWLERFGSFDAPGFSGSLWIHAVSVGEVNAAEPLVKALQRSYAHAPLVVSTVTPTGAARVQQLFGDSVFHVYLPYDLPFAVRRFMKRVRPRLAVIVETEIWPNLYFACRRRGIPLMIVNARLSERSMRGYKPLRPLIASALRCVSVIAAQSRTDAARYRLLGADPQSVLVSGNMKFDVPIPDGAVAAGAAMRAHWGPRRPVWMAASTHDGEELAVLEAHLKVLQRLPDALLLLAPRHPERFRLVEHTVRSLGFTVATRSLEGVPATAHQVFVIDAMGHGAGAGGAAHLQFGRDHPQPDRGRRRRARGCRRATRPARAAAAARRAAPRTDGRGGATGIRARARGSAARHAAGRRAAAGVGGQRLTAAER*