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SCNpilot_expt_500_bf_scaffold_1386_15

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 13852..14850

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621, ECO:0000313|EMBL:AJP71638.1}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 332.0
  • Bit_score: 558
  • Evalue 7.40e-156
tRNA-dihydrouridine synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031DF82D similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 332.0
  • Bit_score: 583
  • Evalue 1.20e-163
  • rbh
dihydrouridine synthase TIM-barrel protein nifR3 similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 332.0
  • Bit_score: 539
  • Evalue 1.00e-150
  • rbh

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGAGTGAACTCGCCCCCATCCAGATCGGCCCGGTAACGGTCGAAGCGCCGGTGCTGCTCGCGCCGATGACGGGCGTGACCGACCTGCCGTTCCGCCGCGCGGTGCGCCGCTACGGCTCGGGGTTGAACGTCACCGAGATGATCGCCAGCGCGGCCGCCATCCGCGATACGCGCCAGTCGATCCAGAAGGCCGCCTGGGATCCGATCGAGGAGCCGGTGTCGATGCAGCTCGTCGGCTGCTCGCCCCCCGAAATGGCCGAGGCCGCCAAGCTCAACGAGGATCGCGGCGCCGCGATCATCGACATCAACATGGGCTGCCCGGTCCGCAAGGTGACCAACGGCGATGCCGGCTCGGCGCTGATGCGCGACCTGAAGCACGCCGCCGCGATCGTCGATGCCTGCGTCAAGGCCGTGAACGTGCCGGTCACGCTCAAGATGCGCATGGGCTGGTGCCATGACAGCCTCAATGCGCCTGAGCTGGCGCGCATTGCCGAGGATCTGGGCGTGAAGATGGTCACCGTCCATGGCCGCACGCGCAACCAGATGTATCGCGGCTCGGCCGACTGGAGCTTCGTCCGCACGGTGAAGGACGCGGTGTCGATCCCGGTGATCGTCAATGGCGACATCTGCTCGGTCGAGGATGCCCGAGAGGCGCTCCGCCAGTCCGGTGCGGACGGGCTGATGATCGGGCGCGGCGCCTATGGCAAGCCGTGGATCCTGCGCCAGGTGATGGACGCGCTGACCGGCAAGGGTGAGCGCGCCGATCCAGGAATCGACGAACAATATCGCGTTATCATAGAGCATTACGTCGAGAGTCTCGAACATTATGGGGAGATGACCGGCGTCAACATGATGCGCAAGCATCTGGGCTGGTACACCAAGGGCCTCACGGGATCGGCGGAGTTCCGCAACAAGGTCAACCAGATAGCCGACGCCAGGACAGTGCTGGCGATGCTCGACGAATTCTACGCGCCGTGGCGTTCCCGCGCGGCGGCCTGA
PROTEIN sequence
Length: 333
MSELAPIQIGPVTVEAPVLLAPMTGVTDLPFRRAVRRYGSGLNVTEMIASAAAIRDTRQSIQKAAWDPIEEPVSMQLVGCSPPEMAEAAKLNEDRGAAIIDINMGCPVRKVTNGDAGSALMRDLKHAAAIVDACVKAVNVPVTLKMRMGWCHDSLNAPELARIAEDLGVKMVTVHGRTRNQMYRGSADWSFVRTVKDAVSIPVIVNGDICSVEDAREALRQSGADGLMIGRGAYGKPWILRQVMDALTGKGERADPGIDEQYRVIIEHYVESLEHYGEMTGVNMMRKHLGWYTKGLTGSAEFRNKVNQIADARTVLAMLDEFYAPWRSRAAA*