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SCNpilot_expt_500_bf_scaffold_1386_16

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 15340..15867

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:AJP71639.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 173.0
  • Bit_score: 306
  • Evalue 2.70e-80
nitrogen-specific signal transduction histidine kinase NtrB (EC:2.7.3.-); K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 175.0
  • Bit_score: 210
  • Evalue 5.80e-52
histidine kinase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D670F6 similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 175.0
  • Bit_score: 312
  • Evalue 2.70e-82
  • rbh

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGCAGGACTTCACCGACACGCGGCCGCTCAAGCTGGTGCCGACCAACGTCTATCCGCTGCTCGACCATGCCCGCCGCGTCGCGCTGGCCGGGTTCGCGCGGGGGATGGTGATCGAGGAGCGCTTCGATCCCTCGCTGCCGCCGGTGCTGATCGATCCCGATGCCTTCCAGCAGGTGATGATGAACCTGCTCAAGAATGCCGCCGAAGCGCTGGCCGGGCTCGCCCAGCCGCGGATCATCCTCTCCACCGCCTATCGCCACGGCATGTCGGTGAGCACCGGCAGCGGCCGCCCGCGCCAGCCGCTCCCGATCGAGATCCTCGTCATGGACAACGGCCCCGGCGCGCCCGAGGACATTGCCGAGCATCTGTTCGAGCCCTTCGTCTCCGGCAAGCCGGAGGGGAAGGGGCTCGGCCTGCCGCTGGTCGAGAAGCTGGTCCGCGATCAGGGCGGCATCGTCCAATATGCCCGCGAGCGCATGCCCGAAATGACTGTCTTCCGCATCCTCCTGCCAAGGGCCCGGGCATGA
PROTEIN sequence
Length: 176
MQDFTDTRPLKLVPTNVYPLLDHARRVALAGFARGMVIEERFDPSLPPVLIDPDAFQQVMMNLLKNAAEALAGLAQPRIILSTAYRHGMSVSTGSGRPRQPLPIEILVMDNGPGAPEDIAEHLFEPFVSGKPEGKGLGLPLVEKLVRDQGGIVQYARERMPEMTVFRILLPRARA*