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SCNpilot_expt_500_bf_scaffold_3910_15

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 9715..10974

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 413.0
  • Bit_score: 577
  • Evalue 1.90e-161
pseudouridine synthase; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 436.0
  • Bit_score: 567
  • Evalue 2.60e-159
  • rbh
pseudouridine synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DA41F9 similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 359.0
  • Bit_score: 589
  • Evalue 2.10e-165
  • rbh

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGAGCGATGCCGTCCGCCAATTCCTGGTCAAGGCCGATGACGACGGCATCCGGCTCGATCGCTGGTTCAAGCGGCACATGCCGGACACCAGCTTCAACACCGTCTCGCGCTGGGCCCGCACCGGCCAGCTGCGCGTCGACGGCGCGCGCGCCAAGCCGGGCGACCATGTCAGCGAGGGCCAGGTGATCCGCGTGCCTCCCGCCGAGCCGGCCAAGCCCGAAAAGCCCGGCCGCCCGAAGCGCGAACGCATCAAGCTCAGCGACGAGCAGATCGACTTCGCCCGCAGCCTGGTGATCCACCGCGACGACGCAGCGCTGGTGCTCAACAAGCCGCCGGGCCTCGCCACCCAGGGCGGCACCAAGACCACCGAGCATGTCGACGGCCTGCTCGACGCGCTCCAGTTCGAAGCGGAGGGCCGGCCCAAGCTCGTCCACCGGCTGGACAAGGACACGTCGGGCGCGCTGCTCGTCGCCCGCACCGCCCGCGCCGCGGCGGCCTTCTCGAAGAACTTTTCCAGCCGCACCGCGCGGAAAGTCTATTGGGCGCTGGTGGTCGGCGTGCCCAGCATCGAGGACGGCATCATCGACCTGCCGATCGGCAAGCAGCCGGGCACCGGCGGCGAGAAGATGCAGGTCGACGAGAAGGAAGGCCAGCCCAGCCGCTCGCGCTACCGCGTGATCGGCCGCGCCGGCAACCGCGCCGCCTGGGTCGAGCTCCAGCCCTTCACCGGGCGCACCCACCAGCTGCGCGTCCACATGGCGGCGATCGGCTTCCCCATCGTCGGCGACGGCAAATATGGCGGGCCCGAGGCGTTCCTGACCGGCGGCATCAGCCGCAAGATGCACCTCCATGCACGCCGCATCCGCGTCGACCATCCCGATGGCGAGAAGATCGACGTGCGCGCCGCGCTGCCGCATCACTTCGCCGAATCGCTCGCCACGCTGGGCTTCGAGGAAGCCGAAGGCGACGCGCTGCAGCTCGACGACGGCCCCGCCCCGCTCACCAAGGAGCAGCAAAAGGCCAATGCGCGGGCCCATGCCAAGACGGTCCGCAAGGAGCGCCGCGGCGAACGGCGCGGCCGCGGCGAAGGCCCTAGCGGCGACAAGCCCGCGCCTCGCAGCGGCGGCAAGCCGAGCACGCGCAAGTCGCCCGCCGCCAAGCCGGGCGGCAAGCCGGCGGCCCGCAAGCCTGCGCCGCGCGGCGCCCGGCCCGGCCCGCGCGCCGGCGGCGACAAGCCCCGCGCGCCGCGGAGCCGCTGA
PROTEIN sequence
Length: 420
MSDAVRQFLVKADDDGIRLDRWFKRHMPDTSFNTVSRWARTGQLRVDGARAKPGDHVSEGQVIRVPPAEPAKPEKPGRPKRERIKLSDEQIDFARSLVIHRDDAALVLNKPPGLATQGGTKTTEHVDGLLDALQFEAEGRPKLVHRLDKDTSGALLVARTARAAAAFSKNFSSRTARKVYWALVVGVPSIEDGIIDLPIGKQPGTGGEKMQVDEKEGQPSRSRYRVIGRAGNRAAWVELQPFTGRTHQLRVHMAAIGFPIVGDGKYGGPEAFLTGGISRKMHLHARRIRVDHPDGEKIDVRAALPHHFAESLATLGFEEAEGDALQLDDGPAPLTKEQQKANARAHAKTVRKERRGERRGRGEGPSGDKPAPRSGGKPSTRKSPAAKPGGKPAARKPAPRGARPGPRAGGDKPRAPRSR*