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SCNpilot_expt_500_bf_scaffold_3910_16

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 10974..11576

Top 3 Functional Annotations

Value Algorithm Source
negative transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287F2D9 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 199.0
  • Bit_score: 287
  • Evalue 1.00e-74
Negative transcriptional regulator {ECO:0000313|EMBL:AJP70651.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 198.0
  • Bit_score: 280
  • Evalue 1.80e-72
negative transcriptional regulator; K07734 transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 197.0
  • Bit_score: 214
  • Evalue 2.70e-53

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGCATCCGCACCCGGCCTTTCGCTGGGAGGATCGCCCGGCGATCCGCGACCTCGTCCGCGACATCGGCTTCGGCGCGCTCTTCGCCGCGACGCCCGACGGGCCGCGCGTGGCGCATGTGCCGGTGGTGTGGCTGGGCGACGACACGCTCGGCTTCCACCTTGCGCGCGGCAACGGCCTCGCCCGCCATCTGGACGGTGCCACCGCCCTGTTCAACCTGCAGGGGATGGACGCCTATGTGAGCCCGGACTGGTACGGCGCCGGCCCGGATGAAGTGCCGACCTGGAACTATGTCGCGGTCGAGCTCGAAGGCCAGGTGACCCGCACCGACGAGGGCGGGCTGGTCGCGATCCTCGATGCGATCAGCCATGAGCAGGAACGCCGCCTCGCGCCAAAGCCCGAATGGACGCTGGCCAAGGTCGATCCCGCCCGGACCGCCAAGCTGCTCACTGCGATCATCGGCTATCGGCTGGAGATCCGGGCCTGGCGCGGCACCCGCAAGCTTGGCCAGAACAAGCCCGACGCCGCCCGCCTGGCCGCCGCCGACGCGCTGGCGGCGCGGGGCAGCGACGGGATCGCCGCGCTGATGCGGGGGGCGAAGTGA
PROTEIN sequence
Length: 201
MHPHPAFRWEDRPAIRDLVRDIGFGALFAATPDGPRVAHVPVVWLGDDTLGFHLARGNGLARHLDGATALFNLQGMDAYVSPDWYGAGPDEVPTWNYVAVELEGQVTRTDEGGLVAILDAISHEQERRLAPKPEWTLAKVDPARTAKLLTAIIGYRLEIRAWRGTRKLGQNKPDAARLAAADALAARGSDGIAALMRGAK*