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SCNpilot_expt_500_bf_scaffold_5569_20

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 14717..15394

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA5CF similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 224.0
  • Bit_score: 337
  • Evalue 7.60e-90
  • rbh
Putative two-component response regulator {ECO:0000313|EMBL:GAM02274.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 224.0
  • Bit_score: 330
  • Evalue 1.70e-87
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 226.0
  • Bit_score: 265
  • Evalue 1.50e-68

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Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGGCCCGCATCCTGGTGATCGAGGACGACGACAGCACCGCGCGCGAGATCGCGGCGGAACTGTCCGCGCACGGCCATGACGTGCTGATCGCGGCGGATGGCGCGGCGGGGCTGGAGCGCGCCACCCGCGAGGCGTTCGACGCGATCACGCTGGACCGGATGCTGCCGGGGCTGGAGGGGCTGGAAGTGGTCGCCAGCCTGCGCCAACGACGCGTAGACGTGCCGGTGCTGATGATCAGCGCGCTGAGCGACGTGGACGAGCGGATCGCGGGCCTGCGCGCAGGCGGCGACGATTATCTCGTGAAGCCCTTCGCCCCCAACGAGATGGCGATGCGCGTCGAGGTGCTAATCCGCCGCCACCGCGAGCGCGCCGACGTGATGGTGCTGCGCGCCGGCGATATCGAGCTGGACCTCGCCCGGCGCACCGCCACCGTCGGCGGCGAGCCGGTGCGGCTGCTGCACATGGAGTTCCGCCTGCTCGAATTCCTGATGCGCAACCAGGGCGAGACGGTGAGCCGCCGCATCATCTTCGAGCAGGTCTGGGGATATTATTTCGATCCCGGCGCGAACCTCATCAATGTCCATATCGCGCGGCTGCGCAAGAAGCTCGACCGGCCCGGCGCGCCATCGGCGATCGCGACCGTGAAGGGCGAGGGCTATCGCCTCGATGCTCGCTGA
PROTEIN sequence
Length: 226
MARILVIEDDDSTAREIAAELSAHGHDVLIAADGAAGLERATREAFDAITLDRMLPGLEGLEVVASLRQRRVDVPVLMISALSDVDERIAGLRAGGDDYLVKPFAPNEMAMRVEVLIRRHRERADVMVLRAGDIELDLARRTATVGGEPVRLLHMEFRLLEFLMRNQGETVSRRIIFEQVWGYYFDPGANLINVHIARLRKKLDRPGAPSAIATVKGEGYRLDAR*