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SCNpilot_expt_500_bf_scaffold_5569_21

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 15384..16733

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 457.0
  • Bit_score: 482
  • Evalue 9.10e-133
HAMP domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WWQ5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 457.0
  • Bit_score: 482
  • Evalue 6.50e-133
  • rbh
integral membrane sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 461.0
  • Bit_score: 296
  • Evalue 1.60e-77

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ATGCTCGCTGACCGGCTGCGCTTCGCGGATATCCGGCGCACCAGCGCCTTCCGCCTGACGGCGATGCTGGGCGTGACCTTCGCCGCCGGCATCGTGCTGCTGCTCGGCGCGATCTACCTGCTGACCGCGCGGGAGCTGACCAGCCGCAGCGACCGCATCCTCGCGGACCTCGCCGCGCAGGTGCTGGCGACGCCGGCGCAGGCGCTGCCCGCCCGCATCCGGCAGGAGAATGCGCGCAACGAGCCGGGGCTGAACTTCTTCGGCCTGATCAGCGGCGACGGGGAAGCGATCGCGGGCAGGCTCTCGACGATGCCGGCCAGAGGCTATGACCGCCCGGTCGACGTGGAGGACGCGGGCGGCGGGATCGGGCCGATCCGCCTGCTCGCGCGCCGCACGCCGAACGGCGAGACGCTGCTGGTCGGGCGCGACATCAGCCAGATACGCGACCTGCGGCTCAGGATGCTGGAGATACTGGTGTGGAGCGGCCTCGCCATCGTGCTCGGCGTCGGCCTCACCGCGATCGGCCTCAGCATCGGGCCGCTGCGCCGGGTGCGCGACCTTCAGGCCGCGAGCCGGGCGATCGCGGCGGGTGATCTCGCGCTGCGGATGCCGATCGCCGGACGGCACGACGAGCTGGACCTGTTCGCCGATACGGTGAACGCGATGGTCGAGGACGTCGCGCGGACCATCGCGCAGGTGAAGGGCGTGACCGACGCGATCGCGCATGACCTGCGCACCCCGCTGACCCGCGTCCGCGCCGGCCTGCACCGCATCGCGCAGGACGATGCCCTGCCGCCCGGCCAGCGGGAGCGGCTCGTGGCGGCGGTGGGCGATCTCGATACCGTGCTGGAGCGGTTCGCCGCGCTGCTGCGCATCTCGGAACTGGAAGCGGGGCAGCGCCGCGCCGGCTTCGCGCCGGTCGACCTCGGTGCGATCGCGGCGCGGGTGGGGGAATTGTACGAACCGCTCGCGGAGGACGGCGGCATCGCGCTCGTCATGGATTGCGCGCCGCTATCGGTCCATGGCGACGAGAAGCTGCTGTTCGAGGCGGTCAGCAACCTTGTCGACAATGCGATCAAGTTCGGCCGCGAGGGCGGACGGGTCTCTGTCGTCACCGGCGACGAGGGCGAGGGATGGCTGCTCGACGTGCGCGACGACGGGCCGGGCATCGCGGCCGACGAGCGCGAGGCGGTGCTGCGGCGCTTTCACCGCGGCAGCAACGCGGCCGCCGCGCCCGGCTCCGGACTGGGGCTCAGCGTGGTTTCCGCGATCCTCGGCCTCCACGGCCTGCGGCTGGAATTGCTCGATGCGGCGCCGGGGTTGACCGCGCGCATCCGGCCGGCGGGATAA
PROTEIN sequence
Length: 450
MLADRLRFADIRRTSAFRLTAMLGVTFAAGIVLLLGAIYLLTARELTSRSDRILADLAAQVLATPAQALPARIRQENARNEPGLNFFGLISGDGEAIAGRLSTMPARGYDRPVDVEDAGGGIGPIRLLARRTPNGETLLVGRDISQIRDLRLRMLEILVWSGLAIVLGVGLTAIGLSIGPLRRVRDLQAASRAIAAGDLALRMPIAGRHDELDLFADTVNAMVEDVARTIAQVKGVTDAIAHDLRTPLTRVRAGLHRIAQDDALPPGQRERLVAAVGDLDTVLERFAALLRISELEAGQRRAGFAPVDLGAIAARVGELYEPLAEDGGIALVMDCAPLSVHGDEKLLFEAVSNLVDNAIKFGREGGRVSVVTGDEGEGWLLDVRDDGPGIAADEREAVLRRFHRGSNAAAAPGSGLGLSVVSAILGLHGLRLELLDAAPGLTARIRPAG*