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SCNpilot_expt_500_bf_scaffold_2406

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2406_1
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..792
DNA (792bp) protein (264aa)
Galactonate dehydratase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ETQ3_9RHIZ rbh
2-oxo-3-deoxygalactonate 6-phosphate aldolase {ECO:0000313|EMBL:KKB11963.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase rbh
SCNpilot_expt_500_bf_scaffold_2406_2
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

794..1555
DNA (762bp) protein (254aa)
Putative oxidoredutase, sulfate metabolism protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F681_9RHIZ rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KKB11962.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_500_bf_scaffold_2406_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1590..2339
DNA (750bp) protein (250aa)
Putative transcriptional regulator protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGS1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB11961.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
transcriptional regulator, GntR family
SCNpilot_expt_500_bf_scaffold_2406_4
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2293..3069
DNA (777bp) protein (259aa)
rbtD; Ribitol 2-dehydrogenase (RDH) (EC:1.1.1.56) rbh
Ribitol 2-dehydrogenase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XSU8_RHIRD rbh
Glucose dehydrogenase {ECO:0000313|EMBL:KKB12562.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_expt_500_bf_scaffold_2406_5
unknown

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3255..3656
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2406_6
unknown

Not on your lists

3684..4229
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2406_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4236..4559)
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB08658.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_2406_8
unknown

Not on your lists

4735..5235
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2406_9
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5324..5791
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q8L5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF61550.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
SCNpilot_expt_500_bf_scaffold_2406_10
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5788..6711
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3K8P5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMG51234.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
SCNpilot_expt_500_bf_scaffold_2406_11
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6728..7480)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q8L0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF61545.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
SCNpilot_expt_500_bf_scaffold_2406_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7477..8199)
DNA (723bp) protein (241aa)
Putative RNA polymerase sigma factor n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QK23_9RHIZ
RNA polymerase sigma70 {ECO:0000313|EMBL:KKB10166.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_500_bf_scaffold_2406_13
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8199..9797)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2R141_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF61552.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2406_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9794..10126)
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB08662.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_2406_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10137..10661)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MA25_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKB08663.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2406_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10816..11931
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PKQ3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB08664.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_2406_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11975..12439)
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB08665.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_2406_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12463..13050)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEY2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB08666.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2406_19
unknown

Not on your lists

13222..13671
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2406_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13813..14100)
DNA (288bp) protein (96aa)
2-deoxycytidine 5-triphosphate deaminase {ECO:0000313|EMBL:KKB08148.1}; EC=3.5.4.13 {ECO:0000313|EMBL:KKB08148.1};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
deoxycytidine triphosphate deaminase; K01494 dCTP deaminase [EC:3.5.4.13]
Deoxycytidine triphosphate deaminase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8T6_PELHB
Displaying 20 items

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