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SCNpilot_expt_500_bf_scaffold_4113_20

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 17812..18777

Top 3 Functional Annotations

Value Algorithm Source
lacZ1; beta-D-galactosidase; K12308 beta-galactosidase [EC:3.2.1.23] similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 76.0
  • Bit_score: 135
  • Evalue 2.60e-29
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B682F8 similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 229.0
  • Bit_score: 250
  • Evalue 2.30e-63
Beta-galactosidase {ECO:0000313|EMBL:EJZ18000.1}; Flags: Fragment;; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 179.0
  • Bit_score: 169
  • Evalue 9.30e-39

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Taxonomy

Rhizobium sp. Pop5 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
GTGGATGAAAGCTATTGGGAGCGCGATGTCGAGCGTATAGCTGCCGCCGGCTTCAACAATGTCCGCCTTGGCGAGTTTGCCTGGCACATCTTCGAGCCGCGCGAGAACAGCTTCGACTTCGATCTTTTCGATCGTGCCATCACGGTGCTGGCCAAACATGGCATCAAGACGATCATGTGCACGCCCACCGCGACGCCGCCGCGCTGGCTGACCTATCACCCTGAAGATGACCTGAGCCGCCTCAAGGTGCTGCATGTGCCCCATTGGCTGATCTGGAAGCATGATTGGACCGATCGCATCCGCGCCTTTGCCGAGGGCGGTGGCACGGTGATCCTTACCGCGCGCACCGGCACGCGAGACGAGAACAATCACATTATTCGTGATGCCGCACCGGGCCGGTCGCTTGCCACGCTTGCCGGGGTGACGGTGGAAGAATTCGGGCGGCTGGCTCCGCCCGATGGCGACGGCCTGTTCGAACTCGGTGGTCGCTACGGTGCCAATGCGGTGCGCCAGCGTTTTCCCGCGGAGTCGGCGCAGCGGACATACGCGCTGAAGGTCGGCAACCAGGACGTTGCCGCCGCTCACATGTACGAACTGCTCAATGTCAACGACGGCACCGAGGTGATCGCCAGCTGGTCCAATCGCTTCCTGGAAGGCCAGGCAGCGATCACCTGCCGCACGGTTGGCAAGGGCCGCATCGTCTATGCCGGCACCTATCTCACTCCTGCCCTCATCGACACGCTCATCGCGGGCGAATTCGAAAGGGCCGGTGTAACGCCTTTGCTGGCCGACAAGCCCGCAGATATCGAAGTGACCTTGCGCGAGGCCGATGGGCGCCAGCTGCTCTTCGTGCTCAATCTCTCGCACGAAGCACGCAGCGTTGCCAATCTGCCCGCGGGTGAGGCCTGGTCGGGGCAGCGTTCCGCACCGGCGAAGTGGCCACCCTGCCTGGCCATGAATGCCTGA
PROTEIN sequence
Length: 322
VDESYWERDVERIAAAGFNNVRLGEFAWHIFEPRENSFDFDLFDRAITVLAKHGIKTIMCTPTATPPRWLTYHPEDDLSRLKVLHVPHWLIWKHDWTDRIRAFAEGGGTVILTARTGTRDENNHIIRDAAPGRSLATLAGVTVEEFGRLAPPDGDGLFELGGRYGANAVRQRFPAESAQRTYALKVGNQDVAAAHMYELLNVNDGTEVIASWSNRFLEGQAAITCRTVGKGRIVYAGTYLTPALIDTLIAGEFERAGVTPLLADKPADIEVTLREADGRQLLFVLNLSHEARSVANLPAGEAWSGQRSAPAKWPPCLAMNA*