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SCNpilot_expt_500_bf_scaffold_4113_21

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(18843..19553)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1X3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 232.0
  • Bit_score: 330
  • Evalue 1.30e-87
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB07038.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 235.0
  • Bit_score: 349
  • Evalue 3.70e-93
AraC family transcriptional regulator; K02855 AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 229.0
  • Bit_score: 186
  • Evalue 1.20e-44

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Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
CAGCGCCACGAGGTCAGCGAAGGCCAGATGTTCGTGGTCCGCCCCTGGCAATTGCACCAGTTCGGCGATCCGCATGTCGGTGCCAGCCAGATCGTTTGGGTGTTGTTCGACGTCGGCGTGCGCCGCCCGCACGAAAACTGGCTGTGGCCCGACTGGATGGCCTGGTCGGAGCGCGACATCGACCGGCTCACCACGCTGCTGTCGCGCAACGAGCAGCATGTATTGACGGCCAGCCGCGAGGTCGCGCGCACCTTCCACGACATCGCCCAGATTGTTGCCGGCAACGATGTGGTGGGCAGCGAAACCCGGATGCGGCTCTCGATCTCGACACTGTTGTTGCAGTTCATGGAACAGCTGGAAAGCCAGTCGCCCCAGCTCGATGCCGATCTCGCCAGCTCCAAGCGTACGGTACAGATATTCCTCGATCGCCTGTCGCATGCCTTGGACGAGGATTGGACACTGGAAAACATGGCGGCTGAATGCAGCCTGTCACGCACCCAGTTTTCCCAGCATTGCCAGGCGATCACCAATATGACGCCGGTGCGCTATCTGCAGATGATCCGCCTCGAAGCGGCCAAGCGCTGGCTGAGCGAACGCGCCAATGTCTCGGTGACCGAAATTGCTTTGGAGGCGGGCTTCACGTCCAGCCAGTATTTCGCCACCTGCTACAAGCGCCGCTTCGGCCTGACGCCGCAGGAGAGCCGGCGCTGA
PROTEIN sequence
Length: 237
QRHEVSEGQMFVVRPWQLHQFGDPHVGASQIVWVLFDVGVRRPHENWLWPDWMAWSERDIDRLTTLLSRNEQHVLTASREVARTFHDIAQIVAGNDVVGSETRMRLSISTLLLQFMEQLESQSPQLDADLASSKRTVQIFLDRLSHALDEDWTLENMAAECSLSRTQFSQHCQAITNMTPVRYLQMIRLEAAKRWLSERANVSVTEIALEAGFTSSQYFATCYKRRFGLTPQESRR*