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SCNpilot_expt_500_p_scaffold_1161

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1161_1
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

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comp(1..174)
DNA (174bp) protein (58aa)
7 transmembrane receptor (Rhodopsin family) A n=1 Tax=Philodina roseola RepID=B2L3H7_PHIRO
7 transmembrane receptor (Rhodopsin family) A {ECO:0000313|EMBL:ACC43929.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
SCNpilot_expt_500_p_scaffold_1161_2
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(1943..2548)
DNA (606bp) protein (202aa)
Membrane calcium atpase protein 3, isoform b; K05850 Ca2+ transporting ATPase, plasma membrane [EC:3.6.3.8]
Plasma membrane calcium ATPase (Fragment) n=1 Tax=Adineta vaga RepID=B3VZY6_ADIVA
Plasma membrane calcium ATPase {ECO:0000313|EMBL:ACF16052.1}; Flags: Fragment;; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
SCNpilot_expt_500_p_scaffold_1161_3
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(2665..2880)
DNA (216bp) protein (72aa)
Plasma membrane calcium-transporting ATPase, putative (EC:3.6.3.8); K05850 Ca2+ transporting ATPase, plasma membrane [EC:3.6.3.8]
Plasma membrane calcium ATPase (Fragment) n=1 Tax=Philodina roseola RepID=B2L3H6_PHIRO
Plasma membrane calcium ATPase {ECO:0000313|EMBL:ACC43946.1}; Flags: Fragment;; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
SCNpilot_expt_500_p_scaffold_1161_4
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(3003..3152)
DNA (150bp) protein (50aa)
ATP2B3, PMCA3, PMCA3a; ATPase, Ca++ transporting, plasma membrane 3 (EC:3.6.3.8); K05850 Ca2+ transporting ATPase, plasma membrane [EC:3.6.3.8]
Plasma membrane calcium ATPase (Fragment) n=1 Tax=Philodina roseola RepID=B2L3H6_PHIRO
Plasma membrane calcium ATPase {ECO:0000313|EMBL:ACC43946.1}; Flags: Fragment;; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
SCNpilot_expt_500_p_scaffold_1161_5
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(3591..3839)
DNA (249bp) protein (83aa)
Calcium-transporting ATPase {ECO:0000256|RuleBase:RU361146}; EC=3.6.3.8 {ECO:0000256|RuleBase:RU361146};; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
Plasma membrane calcium-dependent ATPase n=1 Tax=Philodina roseola RepID=B2L3K1_PHIRO
ATP2B3; ATPase, Ca++ transporting, plasma membrane 3
SCNpilot_expt_500_p_scaffold_1161_6
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(3892..4167)
DNA (276bp) protein (92aa)
Calcium-transporting ATPase {ECO:0000256|RuleBase:RU361146}; EC=3.6.3.8 {ECO:0000256|RuleBase:RU361146};; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
Plasma membrane calcium ATPase n=1 Tax=Adineta vaga RepID=B3G3X4_ADIVA
SCNpilot_expt_500_p_scaffold_1161_7
unknown

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comp(4149..4298)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1161_8
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

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comp(4311..4628)
DNA (318bp) protein (106aa)
Calcium-transporting ATPase {ECO:0000256|RuleBase:RU361146}; EC=3.6.3.8 {ECO:0000256|RuleBase:RU361146};; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
ATP2B2, ATP2B4; ATPase, Ca++ transporting, plasma membrane 2; K05850 Ca2+ transporting ATPase, plasma membrane [EC:3.6.3.8]
Plasma membrane calcium-dependent ATPase n=1 Tax=Philodina roseola RepID=B2L3L2_PHIRO
SCNpilot_expt_500_p_scaffold_1161_9
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(4722..5012)
DNA (291bp) protein (97aa)
Calcium-transporting ATPase {ECO:0000256|RuleBase:RU361146}; EC=3.6.3.8 {ECO:0000256|RuleBase:RU361146};; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
hypothetical protein; K05850 Ca2+ transporting ATPase, plasma membrane [EC:3.6.3.8]
Plasma membrane calcium-dependent ATPase n=1 Tax=Philodina roseola RepID=B2L3L2_PHIRO
SCNpilot_expt_500_p_scaffold_1161_10
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(5424..5807)
DNA (384bp) protein (128aa)
Calcium-transporting ATPase {ECO:0000256|RuleBase:RU361146}; EC=3.6.3.8 {ECO:0000256|RuleBase:RU361146};; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
Plasma membrane calcium-dependent ATPase n=1 Tax=Philodina roseola RepID=B2L3L2_PHIRO
hypothetical protein
SCNpilot_expt_500_p_scaffold_1161_11
unknown

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comp(6966..7163)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1161_12
unknown

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9794..9964
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1161_13
unknown

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comp(10104..10370)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1161_14
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(10330..10605)
DNA (276bp) protein (92aa)
similar to Dual specificity protein kinase TTK; K08866 serine/threonine-protein kinase TTK/MPS1 [EC:2.7.12.1]
S/T/Y kinase n=1 Tax=Adineta vaga RepID=B3G3X2_ADIVA
S/T/Y kinase {ECO:0000313|EMBL:ACD88943.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
SCNpilot_expt_500_p_scaffold_1161_15
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(10659..10871)
DNA (213bp) protein (71aa)
S/T/Y kinase n=1 Tax=Adineta vaga RepID=B3G3X2_ADIVA
S/T/Y kinase {ECO:0000313|EMBL:ACD88943.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
SCNpilot_expt_500_p_scaffold_1161_16
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(10825..11250)
DNA (426bp) protein (142aa)
S/T/Y kinase n=1 Tax=Adineta vaga RepID=B3G3X2_ADIVA
S/T/Y kinase {ECO:0000313|EMBL:ACD88943.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
SCNpilot_expt_500_p_scaffold_1161_17
Acromyrmex echinatior, Acromyrmex, Hymenoptera, Neoptera, Arthropoda, Metazoa

Not on your lists


comp(11863..12714)
DNA (852bp) protein (284aa)
methionyl-tRNA synthetase, mitochondrial-like; K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionyl-tRNA synthetase, mitochondrial n=1 Tax=Acromyrmex echinatior RepID=F4X4A7_ACREC
Methionyl-tRNA synthetase, mitochondrial {ECO:0000313|EMBL:EGI58703.1}; TaxID=103372 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Formicidae; Myrmicinae; Acromyrmex.;" source="Acromyrmex echinatior (Panamanian leafcutter ant) (Acromyrmex; octospinosus echinatior).;"
SCNpilot_expt_500_p_scaffold_1161_18
Drosophila sechellia, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

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comp(12760..13041)
DNA (282bp) protein (94aa)
GD20436 gene product from transcript GD20436-RA; K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
GM25865 n=1 Tax=Drosophila sechellia RepID=B4HF35_DROSE
GM25865 {ECO:0000313|EMBL:EDW42209.1}; TaxID=7238 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.;" source="Drosophila sechellia (Fruit fly).;"
SCNpilot_expt_500_p_scaffold_1161_19
Helobdella robusta, Helobdella, Rhynchobdellida, Hirudinea, Annelida, Metazoa

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comp(13091..13327)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Helobdella robusta RepID=T1FS86_HELRO
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_500_p_scaffold_1161_20].
Uncharacterized protein {ECO:0000313|EMBL:ESO09132.1, ECO:0000313|EnsemblMetazoa:HelroP190723}; TaxID=6412 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella.;" source="Helobdella robusta (Californian leech).;"
methionine--tRNA ligase, mitochondrial-like
SCNpilot_expt_500_p_scaffold_1161_20
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists


comp(13353..13619)
DNA (267bp) protein (89aa)
methionyl-tRNA synthetase, mitochondrial-like; K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3I0Q6_STRPU
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_007569-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
SCNpilot_expt_500_p_scaffold_1161_21
unknown

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comp(14422..14610)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1161_22
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

Not on your lists

14758..15705
DNA (948bp) protein (316aa)
Strabismus n=1 Tax=Adineta vaga RepID=B3G3X1_ADIVA
Strabismus {ECO:0000313|EMBL:ACD88942.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
vang-like protein 1-like; K04510 vang-like
SCNpilot_expt_500_p_scaffold_1161_23
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

15981..16385
DNA (405bp) protein (135aa)
Strabismus n=1 Tax=Philodina roseola RepID=B2L3J9_PHIRO
Strabismus {ECO:0000313|EMBL:ACC43952.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
vang-like protein 1-like; K04510 vang-like
SCNpilot_expt_500_p_scaffold_1161_24
unknown

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16549..16779
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1161_25
unknown

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16958..17167
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1161_26
unknown

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comp(17337..17645)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1161_27
unknown

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comp(17657..17803)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1161_28
Gallus gallus, Gallus, Galliformes, Aves, Chordata, Metazoa

Not on your lists

comp(17836..18534)
DNA (699bp) protein (233aa)
PREDICTED: transmembrane protease serine 4 isoform X1 n=1 Tax=Gallus gallus RepID=UPI000350415F
Uncharacterized protein {ECO:0000313|Ensembl:ENSGALP00000011964}; TaxID=9031 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus.;" source="Gallus gallus (Chicken).;"
TMPRSS4; transmembrane protease, serine 4; K09635 transmembrane protease, serine 4
SCNpilot_expt_500_p_scaffold_1161_29
unknown

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18984..19142
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1161_30
Musa acuminata, Musa, Zingiberales, commelinids, Streptophyta, Viridiplantae

Not on your lists

19287..21470
DNA (2184bp) protein (728aa)
Ubiquitin carboxyl-terminal hydrolase {ECO:0000256|RuleBase:RU004435}; EC=3.4.19.12 {ECO:0000256|RuleBase:RU004435};; TaxID=214687 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Zingiberales; Musaceae; Musa.;" source="Musa acuminata subsp. malaccensis (Wild banana) (Musa malaccensis).;"
ubiquitin carboxyl-terminal hydrolase 8-like; K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15]
Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Musa acuminata subsp. malaccensis RepID=M0SQZ4_MUSAM
Displaying items 1-30 of 52 in total

View Taxonomy