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SCNpilot_expt_500_p_scaffold_1537

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1537_1
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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904..1623
DNA (720bp) protein (240aa)
U3 small nucleolar RNA-associated protein 15-like protein n=1 Tax=Crassostrea gigas RepID=K1QP46_CRAGI
U3 small nucleolar RNA-associated protein 15-like protein {ECO:0000313|EMBL:EKC30575.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
U3 small nucleolar RNA-associated protein 15 homolog
SCNpilot_expt_500_p_scaffold_1537_2
Salmo salar, Salmo, Salmoniformes, Neopterygii, Chordata, Metazoa

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1634..2173
DNA (540bp) protein (180aa)
U3 small nucleolar RNA-associated protein 15 homolog n=1 Tax=Salmo salar RepID=B5X2W0_SALSA
GI21800 gene product from transcript GI21800-RA; K14549 U3 small nucleolar RNA-associated protein 15
U3 small nucleolar RNA-associated protein 15 homolog {ECO:0000313|EMBL:ACI33641.1}; TaxID=8030 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo.;" source="Salmo salar (Atlantic salmon).;"
SCNpilot_expt_500_p_scaffold_1537_3
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

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2204..2749
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3JN44_STRPU
UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)-like; K14549 U3 small nucleolar RNA-associated protein 15
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_028036-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
SCNpilot_expt_500_p_scaffold_1537_4
unknown

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comp(4492..4713)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1537_5
Zootermopsis nevadensis, Zootermopsis, Isoptera, Neoptera, Arthropoda, Metazoa

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5119..8106
DNA (2988bp) protein (996aa)
CG42613, isoform G n=1 Tax=Drosophila melanogaster RepID=UPI000237F68B
Cubilin {ECO:0000313|EMBL:KDR22176.1}; TaxID=136037 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Orthopteroidea; Dictyoptera; Isoptera; Termopsidae; Zootermopsis.;" source="Zootermopsis nevadensis (Dampwood termite).;"
GG23097 gene product from transcript GG23097-RA
SCNpilot_expt_500_p_scaffold_1537_6
unknown

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9997..10302
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1537_7
Corvus brachyrhynchos, Corvus, Passeriformes, Aves, Chordata, Metazoa

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10561..10779
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Gallus gallus RepID=E1BXI4_CHICK
BBS7; Bardet-Biedl syndrome 7
Bardet-Biedl syndrome 7 protein {ECO:0000313|EMBL:KFO60714.1}; Flags: Fragment;; TaxID=85066 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.;" source="Corvus brachyrhynchos (American crow).;"
SCNpilot_expt_500_p_scaffold_1537_8
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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11064..11405
DNA (342bp) protein (114aa)
PREDICTED: Bardet-Biedl syndrome 7 protein homolog n=1 Tax=Zonotrichia albicollis RepID=UPI000393CC54
Uncharacterized protein {ECO:0000313|EMBL:EKC23597.1}; Flags: Fragment;; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
BBS7; Bardet-Biedl syndrome 7
SCNpilot_expt_500_p_scaffold_1537_9
Oryzias latipes, Oryzias, Beloniformes, Neopterygii, Chordata, Metazoa

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11447..11638
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Oryzias latipes RepID=H2N0J6_ORYLA
Bardet-Biedl syndrome 7 protein-like
Uncharacterized protein {ECO:0000313|Ensembl:ENSORLP00000024907}; TaxID=8090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias.;" source="Oryzias latipes (Japanese rice fish) (Japanese killifish).;"
SCNpilot_expt_500_p_scaffold_1537_10
Mus musculus, Mus, Rodentia, Mammalia, Chordata, Metazoa

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11700..11864
DNA (165bp) protein (55aa)
Bardet-Biedl syndrome 7 n=1 Tax=Mus musculus RepID=B1ATV6_MOUSE
Bbs7, 8430406N16Rik; Bardet-Biedl syndrome 7 (human)
Bardet-Biedl syndrome 7 protein homolog {ECO:0000313|Ensembl:ENSMUSP00000103790}; TaxID=10090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.;" source="Mus musculus (Mouse).;"
SCNpilot_expt_500_p_scaffold_1537_11
Monodelphis domestica, Monodelphis, Didelphimorphia, Mammalia, Chordata, Metazoa

Not on your lists

11973..12440
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Monodelphis domestica RepID=F7GJV3_MONDO
Bbs7, 8430406N16Rik; Bardet-Biedl syndrome 7 (human)
Uncharacterized protein {ECO:0000313|Ensembl:ENSMODP00000023616}; TaxID=13616 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis.;" source="Monodelphis domestica (Gray short-tailed opossum).;"
SCNpilot_expt_500_p_scaffold_1537_12
Nephasoma pellucidum, Nephasoma, Golfingiida, Sipuncula, Annelida, Metazoa

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comp(12610..12903)
DNA (294bp) protein (98aa)
Ribosomal protein l13 (Fragment) n=1 Tax=Nephasoma pellucidum RepID=S6CNG0_9ANNE
Ribosomal protein l13 {ECO:0000313|EMBL:CCD27765.1}; Flags: Fragment;; TaxID=360536 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Sipuncula; Sipunculidea; Golfingiida; Golfingiidae; Nephasoma.;" source="Nephasoma pellucidum.;"
similar to RPL13 protein; K02873 large subunit ribosomal protein L13e
SCNpilot_expt_500_p_scaffold_1537_13
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists


comp(12900..13301)
DNA (402bp) protein (134aa)
60S ribosomal protein L13 n=1 Tax=Branchiostoma floridae RepID=C3YFH5_BRAFL
hypothetical protein; K02873 large subunit ribosomal protein L13e
60S ribosomal protein L13 {ECO:0000256|RuleBase:RU000572}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_p_scaffold_1537_14
unknown

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13998..14180
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1537_15
unknown

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15253..15561
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1537_16
unknown

Not on your lists

15631..15816
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1537_17
unknown

Not on your lists

16308..16478
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1537_18
unknown

Not on your lists

comp(16746..17045)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1537_19
Aedes aegypti, Aedes, Diptera, Neoptera, Arthropoda, Metazoa

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comp(17638..18375)
DNA (738bp) protein (246aa)
AAEL005507-PA n=1 Tax=Aedes aegypti RepID=Q179V1_AEDAE
inhibitory pou; K09366 POU domain transcription factor, class 4
POU domain protein {ECO:0000256|RuleBase:RU361194}; TaxID=7159 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia.;" source="Aedes aegypti (Yellowfever mosquito) (Culex aegypti).;"
SCNpilot_expt_500_p_scaffold_1537_20
unknown

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comp(20458..20688)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1537_21
unknown

Not on your lists

21064..21219
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1537_22
unknown

Not on your lists

22861..23082
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1537_23
unknown

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23172..23453
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1537_24
unknown

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24887..25090
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 24 items

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