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SCNpilot_expt_500_p_scaffold_1646

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1646_1
unknown

Not on your lists

comp(1625..1858)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_2
Lepisosteus oculatus, Lepisosteus, Semionotiformes, Neopterygii, Chordata, Metazoa

Not on your lists

3748..5010
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Ficedula albicollis RepID=U3JY47_FICAL
Uncharacterized protein {ECO:0000313|Ensembl:ENSLOCP00000008708}; TaxID=7918 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus.;" source="Lepisosteus oculatus (Spotted gar).;"
similar to atrophin-1 like protein; K05628 arginine-glutamic acid dipeptide (RE) repeats
SCNpilot_expt_500_p_scaffold_1646_3
unknown

Not on your lists

5189..5980
DNA (792bp) protein (264aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_4
unknown

Not on your lists

comp(5951..6073)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_5
unknown

Not on your lists

6103..6696
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_6
unknown

Not on your lists

comp(6579..6824)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_7
unknown

Not on your lists

6956..7150
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_8
unknown

Not on your lists

comp(7295..7513)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_9
unknown

Not on your lists

7871..7990
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_10
Ancylostoma duodenale, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(8759..8998)
DNA (240bp) protein (80aa)
Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_1032 n=1 Tax=Oikopleura dioica RepID=E4Y368_OIKDI
Homeobox domain protein {ECO:0000313|EMBL:KIH47044.1}; TaxID=51022 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma duodenale.;"
GD17261 gene product from transcript GD17261-RA; K09355 pre-B-cell leukemia transcription factor 1
SCNpilot_expt_500_p_scaffold_1646_11
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

comp(8988..9386)
DNA (399bp) protein (133aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RYQ8_NEMVE
hypothetical protein ; K09355 pre-B-cell leukemia transcription factor 1
Predicted protein {ECO:0000313|EMBL:EDO43361.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
SCNpilot_expt_500_p_scaffold_1646_12
unknown

Not on your lists

comp(9440..9766)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_13
Tauraco erythrolophus, Tauraco, Musophagiformes, Aves, Chordata, Metazoa

Not on your lists

comp(9934..10521)
DNA (588bp) protein (196aa)
PREDICTED: homeobox protein extradenticle-like, partial n=1 Tax=Sorex araneus RepID=UPI00033163DD
Pre-B-cell leukemia transcription factor 1 {ECO:0000313|EMBL:KFV10628.1}; Flags: Fragment;; TaxID=121530 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Musophagiformes; Musophagidae; Tauraco.;" source="Tauraco erythrolophus (Red-crested turaco).;"
similar to predicted protein
SCNpilot_expt_500_p_scaffold_1646_14
unknown

Not on your lists

comp(10531..10767)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_15
unknown

Not on your lists

comp(13737..13931)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_16
unknown

Not on your lists

comp(14039..14224)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_17
unknown

Not on your lists

comp(14277..14531)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_18
Citrus sinensis, Citrus, Sapindales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(14560..14994)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Citrus clementina RepID=V4SF90_9ROSI
Uncharacterized protein {ECO:0000313|EMBL:KDO79071.1}; TaxID=2711 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Citrus.;" source="Citrus sinensis (Sweet orange) (Citrus aurantium var. sinensis).;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1646_19
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15177..16400
DNA (1224bp) protein (408aa)
FMN-dependent alpha-hydroxy acid dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15] rbh
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGI4_HALO1 rbh
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:ACY12730.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCNpilot_expt_500_p_scaffold_1646_20
unknown

Not on your lists

16729..17106
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_21
unknown

Not on your lists

comp(17221..17619)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_22
Flavobacteria bacterium BBFL7, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17674..18141)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017449A7
Uncharacterized protein {ECO:0000313|EMBL:EAS20933.1}; TaxID=156586 species="Bacteria; Bacteroidetes; Flavobacteriia.;" source="Flavobacteria bacterium (strain BBFL7).;"
N-formylglutamate amidohydrolase
SCNpilot_expt_500_p_scaffold_1646_23
unknown

Not on your lists

comp(18337..19428)
DNA (1092bp) protein (364aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_24
unknown

Not on your lists

comp(19438..20055)
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_25
unknown

Not on your lists

comp(20416..21237)
DNA (822bp) protein (274aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_26
unknown

Not on your lists

22311..22409
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1646_27
Dendroctonus ponderosae, Dendroctonus, Coleoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

22564..22716
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Dendroctonus ponderosae RepID=J3JYP4_DENPD
Chd64; calponin-like protein Chd64
Transgelin {ECO:0000256|RuleBase:RU361224}; TaxID=77166 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Scolytinae; Dendroctonus.;" source="Dendroctonus ponderosae (Mountain pine beetle).;"
SCNpilot_expt_500_p_scaffold_1646_28
Daphnia pulex, Daphnia, Diplostraca, Phyllopoda, Arthropoda, Metazoa

Not on your lists

comp(23669..24187)
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Latimeria chalumnae RepID=H3A9D1_LATCH
ABC protein, subfamily ABCF {ECO:0000313|EMBL:EFX88800.1}; TaxID=6669 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.;" source="Daphnia pulex (Water flea).;"
ABCF2, MGC128735; ATP-binding cassette, sub-family F (GCN20), member 2; K06185 ATP-binding cassette, subfamily F, member 2
SCNpilot_expt_500_p_scaffold_1646_29
Volvox carteri, Volvox, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(24483..24671)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Volvox carteri RepID=D8UDB5_VOLCA
hypothetical protein; K06185 ATP-binding cassette, subfamily F, member 2
Putative uncharacterized protein {ECO:0000313|EMBL:EFJ42281.1}; TaxID=3067 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox.;" source="Volvox carteri (Green alga).;"
SCNpilot_expt_500_p_scaffold_1646_30
unknown

Not on your lists

28117..28725
DNA (609bp) protein (203aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

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