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SCNpilot_expt_500_p_scaffold_1694

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1694_1
Oikopleura dioica, Oikopleura, Appendicularia, Chordata, Metazoa

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comp(364..498)
DNA (135bp) protein (45aa)
nedd4l; neural precursor cell expressed, developmentally down-regulated 4-like; K10591 E3 ubiquitin-protein ligase NEDD4 [EC:6.3.2.19]
E3 ubiquitin-protein ligase n=1 Tax=Oikopleura dioica RepID=E4XK29_OIKDI
Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_49 {ECO:0000313|EMBL:CBY24805.1}; TaxID=34765 species="Eukaryota; Metazoa; Chordata; Tunicata; Appendicularia; Oikopleuridae; Oikopleura.;" source="Oikopleura dioica (Tunicate).;"
SCNpilot_expt_500_p_scaffold_1694_2
Latimeria chalumnae, Latimeria, Coelacanthiformes, Chordata, Metazoa

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comp(1033..1419)
DNA (387bp) protein (129aa)
PREDICTED: E3 ubiquitin-protein ligase NEDD4 isoform X1 n=2 Tax=Latimeria chalumnae RepID=UPI0003C1257A
Uncharacterized protein {ECO:0000313|Ensembl:ENSLACP00000017683}; TaxID=7897 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria.;" source="Latimeria chalumnae (West Indian ocean coelacanth).;"
NEDD4; neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
SCNpilot_expt_500_p_scaffold_1694_3
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

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comp(1447..1599)
DNA (153bp) protein (51aa)
PREDICTED: E3 ubiquitin-protein ligase NEDD4 isoform X3 n=1 Tax=Jaculus jaculus RepID=UPI0003334195
e3 ubiquitin-protein ligase NEDD4-like
Predicted protein {ECO:0000313|EMBL:EDO46071.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
SCNpilot_expt_500_p_scaffold_1694_4
unknown

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comp(1599..1766)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_5
Xiphophorus maculatus, Xiphophorus, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

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comp(2192..2449)
DNA (258bp) protein (86aa)
E3 ubiquitin-protein ligase {ECO:0000256|PIRNR:PIRNR001569}; EC=6.3.2.- {ECO:0000256|PIRNR:PIRNR001569};; TaxID=8083 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus.;" source="Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).;"
PREDICTED: E3 ubiquitin-protein ligase Itchy-like n=1 Tax=Oryzias latipes RepID=UPI0002A4A783
E3 ubiquitin-protein ligase Itchy-like
SCNpilot_expt_500_p_scaffold_1694_6
unknown

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comp(2401..2631)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_7
unknown

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comp(2658..2930)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_8
Schistosoma mansoni, Schistosoma, Strigeidida, Digenea, Platyhelminthes, Metazoa

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comp(3167..3544)
DNA (378bp) protein (126aa)
E3 ubiquitin-protein ligase nedd-4 ; K13305 E3 ubiquitin-protein ligase NEDD4-like [EC:6.3.2.19]
E3 ubiquitin-protein ligase nedd-4 n=1 Tax=Schistosoma mansoni RepID=UPI0001A627BF
Putative e3 ubiquitin-protein ligase nedd-4 {ECO:0000313|EMBL:CCD80896.1}; TaxID=6183 species="Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma.;" source="Schistosoma mansoni (Blood fluke).;"
SCNpilot_expt_500_p_scaffold_1694_9
unknown

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3920..4075
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_10
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

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comp(4145..4642)
DNA (498bp) protein (166aa)
PREDICTED: phospholipase B1, membrane-associated-like n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0002652DE0
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_018144-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
SCNpilot_expt_500_p_scaffold_1694_11
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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comp(4703..5014)
DNA (312bp) protein (104aa)
26S protease regulatory subunit 4 n=1 Tax=Crassostrea gigas RepID=K1QLT5_CRAGI
26S protease regulatory subunit 4 {ECO:0000313|EMBL:EKC29780.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
phospholipase B1, membrane-associated-like
SCNpilot_expt_500_p_scaffold_1694_12
unknown

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comp(5583..5975)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Anopheles darlingi RepID=E3WQH2_ANODA
SCNpilot_expt_500_p_scaffold_1694_13
unknown

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6521..6835
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_14
Oryzias latipes, Oryzias, Beloniformes, Neopterygii, Chordata, Metazoa

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comp(7121..7393)
DNA (273bp) protein (91aa)
PREDICTED: mitochondrial intermembrane space import and assembly protein 40-B-like n=1 Tax=Aplysia californica RepID=UPI00035962D4
mitochondrial intermembrane space import and assembly protein 40-like
Uncharacterized protein {ECO:0000313|Ensembl:ENSORLP00000021046}; TaxID=8090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias.;" source="Oryzias latipes (Japanese rice fish) (Japanese killifish).;"
SCNpilot_expt_500_p_scaffold_1694_15
unknown

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7405..7674
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_16
unknown

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7943..8173
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_17
Lepisosteus oculatus, Lepisosteus, Semionotiformes, Neopterygii, Chordata, Metazoa

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8240..8749
DNA (510bp) protein (170aa)
Putative immunoglobulin domain protein n=1 Tax=Trichinella spiralis RepID=E5SD76_TRISP
Uncharacterized protein {ECO:0000313|Ensembl:ENSLOCP00000004668}; TaxID=7918 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus.;" source="Lepisosteus oculatus (Spotted gar).;"
putative immunoglobulin domain protein
SCNpilot_expt_500_p_scaffold_1694_18
unknown

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8759..8902
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_19
unknown

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9649..9873
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_20
unknown

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9860..10423
DNA (564bp) protein (188aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_21
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

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comp(11171..11692)
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Adineta vaga RepID=B3G4K7_ADIVA
Putative uncharacterized protein {ECO:0000313|EMBL:ACD54755.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
SCNpilot_expt_500_p_scaffold_1694_22
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(12356..12589)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Adineta vaga RepID=B3G4K7_ADIVA
Putative uncharacterized protein {ECO:0000313|EMBL:ACD54755.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
similar to CG31738-PB, isoform B
SCNpilot_expt_500_p_scaffold_1694_23
unknown

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13053..13298
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_24
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

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comp(13627..13893)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Adineta vaga RepID=B3G4K7_ADIVA
Putative uncharacterized protein {ECO:0000313|EMBL:ACD54755.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
fibronectin type-III domain-containing protein 3a-like
SCNpilot_expt_500_p_scaffold_1694_25
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

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comp(13925..14221)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Adineta vaga RepID=B3G4K7_ADIVA
Putative uncharacterized protein {ECO:0000313|EMBL:ACD54755.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
fibronectin type-III domain-containing protein 3a-like
SCNpilot_expt_500_p_scaffold_1694_26
unknown

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comp(14980..15267)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_27
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

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comp(15646..15954)
DNA (309bp) protein (103aa)
Putative fibronectin type III domain protein n=1 Tax=Trichinella spiralis RepID=E5SI28_TRISP
Uncharacterized protein {ECO:0000313|EMBL:CEK66878.1}; Flags: Fragment;; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupulmonata; Stylommatophora; Sigmurethra; Arionoidea; Arionidae; Arion.;" source="Arion vulgaris.;"
putative fibronectin type III domain protein
SCNpilot_expt_500_p_scaffold_1694_28
unknown

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comp(16796..16939)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_29
unknown

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comp(17094..17249)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1694_30
unknown

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comp(17852..18301)
DNA (450bp) protein (150aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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