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SCNpilot_expt_500_p_scaffold_1700

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1700_1
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

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comp(793..1353)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZDB8_BRAFL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN49473.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_p_scaffold_1700_2
unknown

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comp(1574..1900)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_3
Ciona intestinalis, Ciona, Enterogona, Ascidiacea, Chordata, Metazoa

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comp(2004..2519)
DNA (516bp) protein (172aa)
PREDICTED: transient receptor potential cation channel subfamily A member 1 homolog n=1 Tax=Aplysia californica RepID=UPI000359D02D
Uncharacterized protein {ECO:0000313|Ensembl:ENSCINP00000010301}; TaxID=7719 species="Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona.;" source="Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis).;"
similar to ankyrin repeats-like
SCNpilot_expt_500_p_scaffold_1700_4
unknown

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comp(2507..3229)
DNA (723bp) protein (241aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_5
unknown

Not on your lists

comp(3285..3617)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_6
unknown

Not on your lists

comp(3868..4218)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_7
unknown

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comp(4233..4856)
DNA (624bp) protein (208aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_8
unknown

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comp(4900..6075)
DNA (1176bp) protein (392aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_9
unknown

Not on your lists

comp(6053..6355)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_10
unknown

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comp(6468..7052)
DNA (585bp) protein (195aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_11
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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comp(8032..8601)
DNA (570bp) protein (190aa)
Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea RepID=V4A0R1_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO86841.1}; Flags: Fragment;; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
similar to CG31811-PB, isoform B; K12491 Arf-GAP, GTPase, ANK repeat and PH domain-containing protein 1/2/3
SCNpilot_expt_500_p_scaffold_1700_12
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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comp(9931..10158)
DNA (228bp) protein (76aa)
Centaurin-gamma-1A n=1 Tax=Crassostrea gigas RepID=K1QPI3_CRAGI
Centaurin-gamma-1A {ECO:0000313|EMBL:EKC33009.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
centaurin gamma; K12491 Arf-GAP, GTPase, ANK repeat and PH domain-containing protein 1/2/3
SCNpilot_expt_500_p_scaffold_1700_13
Xenopus laevis, Xenopus, Anura, Amphibia, Chordata, Metazoa

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comp(10209..10679)
DNA (471bp) protein (157aa)
PREDICTED: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X7 n=1 Tax=Chrysemys picta bellii RepID=UPI000388A982
arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like; K12491 Arf-GAP, GTPase, ANK repeat and PH domain-containing protein 1/2/3
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1; Short=AGAP-1;; Centaurin-gamma-2; Short=Cnt-g2;; TaxID=8355 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.;" source="Xenopus laevis (African clawed frog).;"
SCNpilot_expt_500_p_scaffold_1700_14
unknown

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comp(11197..11394)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_15
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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11699..12283
DNA (585bp) protein (195aa)
Transportin-1 n=1 Tax=Crassostrea gigas RepID=K1Q880_CRAGI
Transportin-1 {ECO:0000313|EMBL:EKC30138.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
TNPO1, NV12765; transportin 1
SCNpilot_expt_500_p_scaffold_1700_16
Anopheles darlingi, Anopheles, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

12374..14503
DNA (2130bp) protein (710aa)
PREDICTED: similar to transportin 1 isoform 2 n=1 Tax=Tribolium castaneum RepID=UPI0000D5736E rbh
TNPO1; transportin 1 rbh
Importin beta-2 {ECO:0000313|EMBL:ETN63269.1}; Uncharacterized protein {ECO:0000313|EnsemblMetazoa:ADAC005021-PA}; TaxID=43151 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles.;" source="Anopheles darlingi (Mosquito).;"
SCNpilot_expt_500_p_scaffold_1700_17
unknown

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comp(14922..15143)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_18
unknown

Not on your lists

15284..15481
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_19
unknown

Not on your lists

16037..16573
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_20
unknown

Not on your lists

16606..16887
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_21
unknown

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17600..17713
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_22
unknown

Not on your lists

17743..18069
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_23
unknown

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18191..18334
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_24
Mus musculus, Mus, Rodentia, Mammalia, Chordata, Metazoa

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18409..18744
DNA (336bp) protein (112aa)
PREDICTED: thioredoxin domain-containing protein 5 n=1 Tax=Trichechus manatus latirostris RepID=UPI0002C463F7
Txndc5, AL022641, ERp46, PC-TRP; thioredoxin domain containing 5; K13984 thioredoxin domain-containing protein 5
Thioredoxin domain-containing protein 5 {ECO:0000313|Ensembl:ENSMUSP00000124401}; TaxID=10090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.;" source="Mus musculus (Mouse).;"
SCNpilot_expt_500_p_scaffold_1700_25
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

Not on your lists

20078..20656
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4A5B6_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO88441.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
uncharacterized LOC100635860
SCNpilot_expt_500_p_scaffold_1700_26
unknown

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comp(21617..21931)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_27
unknown

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22364..22900
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_28
unknown

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23489..23644
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1700_29
Placozoa sp. H4, Placozoa, Metazoa

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23751..23912
DNA (162bp) protein (54aa)
60S ribosomal protein L12b n=1 Tax=Placozoa sp. H4 RepID=M4T7Z3_9METZ
60S ribosomal protein L12b {ECO:0000313|EMBL:AGH70159.1}; TaxID=1034858 species="Eukaryota; Metazoa; Placozoa; unclassified Placozoa.;" source="Placozoa sp. H4.;"
60S ribosomal protein L12; K02870 large subunit ribosomal protein L12e
SCNpilot_expt_500_p_scaffold_1700_30
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(24943..25098)
DNA (156bp) protein (52aa)
similar to putative dimethyladenosine transferase; K14191 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
Putative dimethyladenosine transferase n=1 Tax=Crassostrea gigas RepID=K1PZ81_CRAGI
Putative dimethyladenosine transferase {ECO:0000313|EMBL:EKC26948.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
Displaying items 1-30 of 63 in total

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