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SCNpilot_expt_500_p_scaffold_1815

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1815_1
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

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comp(597..1001)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7V8U5_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU12160.1, ECO:0000313|EnsemblMetazoa:CapteP123301}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1815_2
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

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comp(2103..2837)
DNA (735bp) protein (245aa)
PREDICTED: PERQ amino acid-rich with GYF domain-containing protein 2-like n=1 Tax=unknown RepID=UPI0002B41B70
similar to transposase-like
Uncharacterized protein {ECO:0000313|EMBL:EXX78670.1}; TaxID=1432141 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis DAOM 197198w.;"
SCNpilot_expt_500_p_scaffold_1815_3
unknown

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comp(2975..3244)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1815_4
unknown

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comp(3646..3798)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1815_5
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

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comp(4499..4972)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7V8U5_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU12160.1, ECO:0000313|EnsemblMetazoa:CapteP123301}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
cyp-25A3; CYtochrome P450 family member (cyp-25A3)
SCNpilot_expt_500_p_scaffold_1815_6
Trichuris suis, Trichuris, Trichocephalida, Dorylaimia, Nematoda, Metazoa

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comp(4978..5901)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7T5B7_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:KFD52765.1}; TaxID=68888 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichuridae; Trichuris.;" source="Trichuris suis (pig whipworm).;"
cyp-13B2; CYtochrome P450 family member (cyp-13B2)
SCNpilot_expt_500_p_scaffold_1815_7
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6109..6783)
DNA (675bp) protein (225aa)
prmA; 50S ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
Ribosomal protein L11 methyltransferase n=1 Tax=Anoxybacillus flavithermus (strain DSM 21510 / WK1) RepID=PRMA_ANOFW
Putative Methylase {ECO:0000313|EMBL:CDH00452.1}; TaxID=1398200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. feltiae Moldova.;"
SCNpilot_expt_500_p_scaffold_1815_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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6955..7866
DNA (912bp) protein (304aa)
Phytanoyl-CoA dioxygenase (PhyH) n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWP3_9BACT
Putative dehydrogenase {ECO:0000313|EMBL:AIE86107.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Phytanoyl-CoA dioxygenase (PhyH)
SCNpilot_expt_500_p_scaffold_1815_9
Tetrahymena thermophila, Tetrahymena, Hymenostomatida, Oligohymenophorea, Eukaryota

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8233..9066
DNA (834bp) protein (278aa)
Taurine catabolism dioxygenase TauD, TfdA family protein; K03119 taurine dioxygenase [EC:1.14.11.17]
Taurine catabolism dioxygenase TauD, TfdA family protein n=1 Tax=Tetrahymena thermophila (strain SB210) RepID=I7LSX8_TETTS
Taurine catabolism dioxygenase, TauD/TfdA family protein {ECO:0000313|EMBL:EAR83815.1}; TaxID=312017 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena.;" source="Tetrahymena thermophila (strain SB210).;"
SCNpilot_expt_500_p_scaffold_1815_10
unknown

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9532..9654
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1815_11
unknown

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10715..10897
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1815_12
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11740..12405)
DNA (666bp) protein (222aa)
ABC-type uncharacterized transport system, permease and ATPase component n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LQF9_9CHRO
ABC transporter domain-containing protein
ABC transporter domain-containing protein {ECO:0000313|EMBL:AFZ33395.1}; Flags: Precursor;; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
SCNpilot_expt_500_p_scaffold_1815_13
unknown

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comp(12793..13512)
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1815_14
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(13806..14741)
DNA (936bp) protein (312aa)
ABC-type uncharacterized transport system, permease and ATPase component n=1 Tax=Moorea producens 3L RepID=F4XIQ2_9CYAN
ABC-type uncharacterized transport system, permease and ATPase component {ECO:0000313|EMBL:EGJ35564.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
ABC transporter ATP-binding protein; K02021 putative ABC transport system ATP-binding protein
SCNpilot_expt_500_p_scaffold_1815_15
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14925..15644)
DNA (720bp) protein (240aa)
ABC transporter n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C6B9_CROWT
ABC transporter {ECO:0000313|EMBL:EAM51705.1}; Flags: Precursor;; TaxID=165597 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Crocosphaera.;" source="Crocosphaera watsonii WH 8501.;"
ABC transporter domain-containing protein
SCNpilot_expt_500_p_scaffold_1815_16
unknown

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comp(16674..17591)
DNA (918bp) protein (306aa)

This feature has no annotations

Displaying 16 items

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