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SCNpilot_expt_500_p_scaffold_1917

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1917_1
unknown

Not on your lists

comp(292..417)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1917_2
Merops nubicus, Merops, Coraciiformes, Aves, Chordata, Metazoa

Not on your lists

1880..4171
DNA (2292bp) protein (764aa)
slk; STE20-like kinase; K08836 STE20-like kinase [EC:2.7.11.1] rbh
PREDICTED: STE20-like serine/threonine-protein kinase n=1 Tax=Chrysemys picta bellii RepID=UPI000388E0DE rbh
STE20-like serine/threonine-protein kinase {ECO:0000313|EMBL:KFQ32253.1}; TaxID=57421 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Coraciiformes; Meropidae; Merops.;" source="Merops nubicus (Northern carmine bee-eater).;"
SCNpilot_expt_500_p_scaffold_1917_3
Caenorhabditis remanei, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

4577..5329
DNA (753bp) protein (251aa)
Cbr-gck-4; C. briggsae CBR-GCK-4 protein; K08836 STE20-like kinase [EC:2.7.11.1]
C. briggsae CBR-GCK-4 protein n=1 Tax=Caenorhabditis briggsae RepID=UPI00002210D5
CRE-GCK-4 protein {ECO:0000313|EMBL:EFO99438.1}; TaxID=31234 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis remanei (Caenorhabditis vulgaris).;"
SCNpilot_expt_500_p_scaffold_1917_4
unknown

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comp(7353..7463)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1917_5
unknown

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7843..8208
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1917_6
Clonorchis sinensis, Clonorchis, Opisthorchiida, Digenea, Platyhelminthes, Metazoa

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8637..8960
DNA (324bp) protein (108aa)
TLC domain-containing protein 2 n=1 Tax=Clonorchis sinensis RepID=G7YB71_CLOSI
TLC domain-containing protein 2 {ECO:0000313|EMBL:GAA50205.1}; TaxID=79923 species="Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Opisthorchiida; Opisthorchiata; Opisthorchiidae; Clonorchis.;" source="Clonorchis sinensis (Chinese liver fluke).;"
transmembrane protein 56
SCNpilot_expt_500_p_scaffold_1917_7
unknown

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9994..10290
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1917_8
Penicillium brasilianum, Penicillium, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

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10337..11929
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Eimeria acervulina RepID=U6GIH7_EIMAC
Uncharacterized protein {ECO:0000313|EMBL:CEJ55098.1}; TaxID=104259 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium.;" source="Penicillium brasilianum.;"
sqpA; hypothetical protein
SCNpilot_expt_500_p_scaffold_1917_9
unknown

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comp(11939..12115)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1917_10
unknown

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12161..12652
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1917_11
unknown

Not on your lists

13356..13787
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1917_12
unknown

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14214..14465
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1917_13
unknown

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comp(15018..15107)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1917_14
unknown

Not on your lists

comp(15843..15950)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1917_15
unknown

Not on your lists

comp(15955..16107)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1917_16
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(16930..17619)
DNA (690bp) protein (230aa)
similar to FAD1 flavin adenine dinucleotide synthetase homolog; K00953 FAD synthetase [EC:2.7.7.2]
FAD synthetase n=1 Tax=Crassostrea gigas RepID=K1R7T5_CRAGI
FAD synthetase {ECO:0000313|EMBL:EKC37260.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_p_scaffold_1917_17
unknown

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comp(17616..17834)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1917_18
Oryzias latipes, Oryzias, Beloniformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(18461..18709)
DNA (249bp) protein (83aa)
PREDICTED: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform n=1 Tax=Pseudopodoces humilis RepID=UPI000395D969
serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B {ECO:0000256|RuleBase:RU331113}; TaxID=8090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias.;" source="Oryzias latipes (Japanese rice fish) (Japanese killifish).;"
SCNpilot_expt_500_p_scaffold_1917_19
Oryzias latipes, Oryzias, Beloniformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(18769..19137)
DNA (369bp) protein (123aa)
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (Fragment) n=1 Tax=Oryzias latipes RepID=H2MA43_ORYLA
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B {ECO:0000256|RuleBase:RU331113}; TaxID=8090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias.;" source="Oryzias latipes (Japanese rice fish) (Japanese killifish).;"
serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
SCNpilot_expt_500_p_scaffold_1917_20
Ephemerella inconstans, Ephemerella, Ephemeroptera, Palaeoptera, Arthropoda, Metazoa

Not on your lists

comp(19134..19280)
DNA (147bp) protein (49aa)
PREDICTED: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform-like n=1 Tax=Strongylocentrotus purpuratus RepID=UPI00026523D1
ppp2r2c; protein phosphatase 2, regulatory subunit B, gamma; K04354 protein phosphatase 2 (formerly 2A), regulatory subunit B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B {ECO:0000256|RuleBase:RU331113}; Flags: Fragment;; TaxID=681538 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Palaeoptera; Ephemeroptera; Pannota; Ephemerellidae; Ephemerella.;" source="Ephemerella inconstans.;"
SCNpilot_expt_500_p_scaffold_1917_21
Libinia emarginata, Libinia, Decapoda, Eumalacostraca, Arthropoda, Metazoa

Not on your lists

comp(19640..19960)
DNA (321bp) protein (107aa)
PREDICTED: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform n=1 Tax=Latimeria chalumnae RepID=UPI0003C13C11
serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B {ECO:0000256|RuleBase:RU331113}; Flags: Fragment;; TaxID=6807 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Brachyura; Eubrachyura; Majoidea; Majidae; Libinia.;" source="Libinia emarginata (Portly spider crab).;"
SCNpilot_expt_500_p_scaffold_1917_22
Ixodes pacificus, Ixodes, Ixodida, Acari, Arthropoda, Metazoa

Not on your lists

21052..21513
DNA (462bp) protein (154aa)
Ribosomal protein, large P2 n=1 Tax=Ixodes pacificus RepID=Q6B8B1_9ACAR
Ribosomal protein, large P2 {ECO:0000313|EMBL:AAT92169.1}; TaxID=29930 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes.;" source="Ixodes pacificus (western blacklegged tick).;"
60S acidic ribosomal protein P2; K02943 large subunit ribosomal protein LP2
SCNpilot_expt_500_p_scaffold_1917_23
Ophiophagus hannah, Ophiophagus, Squamata, Chordata, Metazoa

Not on your lists

22019..22780
DNA (762bp) protein (254aa)
ubiquitin thioesterase ZRANB1-like; K11862 ubiquitin thioesterase ZRANB1 [EC:3.1.2.-]
Ubiquitin thioesterase ZRANB1 n=1 Tax=Ophiophagus hannah RepID=V8NK50_OPHHA
Ubiquitin thioesterase ZRANB1 {ECO:0000313|EMBL:ETE62644.1}; TaxID=8665 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Elapinae; Ophiophagus.;" source="Ophiophagus hannah (King cobra) (Naja hannah).;"
SCNpilot_expt_500_p_scaffold_1917_24
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

22902..23963
DNA (1062bp) protein (354aa)
similar to LOC495328 protein; K11862 ubiquitin thioesterase ZRANB1 [EC:3.1.2.-]
PREDICTED: ubiquitin thioesterase zranb1-B-like isoform X2 n=1 Tax=Aplysia californica RepID=UPI0003596A00
Uncharacterized protein {ECO:0000313|EMBL:ELU04077.1, ECO:0000313|EnsemblMetazoa:CapteP178164}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
SCNpilot_expt_500_p_scaffold_1917_25
Camponotus floridanus, Camponotus, Hymenoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

23936..24469
DNA (534bp) protein (178aa)
NV10646; ubiquitin thioesterase trabid-like; K11862 ubiquitin thioesterase ZRANB1 [EC:3.1.2.-]
Zinc finger Ran-binding domain-containing protein 1 n=1 Tax=Camponotus floridanus RepID=E2ATC0_CAMFO
Zinc finger Ran-binding domain-containing protein 1 {ECO:0000313|EMBL:EFN63287.1}; TaxID=104421 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Formicidae; Formicinae; Camponotus.;" source="Camponotus floridanus (Florida carpenter ant).;"
Displaying 25 items

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