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SCNpilot_expt_500_p_scaffold_475

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Displaying items 1-30 of 94 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_475_1
Saccharomyces cerevisiae, Saccharomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(3..1244)
DNA (1242bp) protein (414aa)
PREDICTED: uncharacterized protein LOC100211675 n=1 Tax=unknown RepID=UPI0002B4D458
hypothetical protein
Dan4p {ECO:0000313|EMBL:AJR55392.1}; TaxID=1294322 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.;" source="Saccharomyces cerevisiae YJM693.;"
SCNpilot_expt_500_p_scaffold_475_2
unknown

Not on your lists

comp(2600..3007)
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_475_3
unknown

Not on your lists

3276..3521
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_475_4
unknown

Not on your lists

comp(3581..3844)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_475_5
Latimeria chalumnae, Latimeria, Coelacanthiformes, Chordata, Metazoa

Not on your lists

comp(4049..6148)
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Latimeria chalumnae RepID=H3BH60_LATCH
Uncharacterized protein {ECO:0000313|Ensembl:ENSLACP00000021231}; TaxID=7897 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria.;" source="Latimeria chalumnae (West Indian ocean coelacanth).;"
ppp6r2, pp6r2, saps2; protein phosphatase 6, regulatory subunit 2; K15500 serine/threonine-protein phosphatase 6 regulatory subunit 2
SCNpilot_expt_500_p_scaffold_475_6
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

7300..7587
DNA (288bp) protein (96aa)
PREDICTED: dynein beta chain, ciliary-like n=1 Tax=Aplysia californica RepID=UPI0003597A68
Dynein beta chain, ciliary {ECO:0000313|EMBL:EKC20777.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
similar to Beta heavy chain of outer-arm axonemal dynein ATPase
SCNpilot_expt_500_p_scaffold_475_7
Trichoplax adhaerens, Trichoplax, Placozoa, Metazoa

Not on your lists

7577..7963
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RPT9_TRIAD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDV28243.1}; TaxID=10228 species="Eukaryota; Metazoa; Placozoa; Trichoplax.;" source="Trichoplax adhaerens (Trichoplax reptans).;"
SCNpilot_expt_500_p_scaffold_475_8
Trichoplax adhaerens, Trichoplax, Placozoa, Metazoa

Not on your lists

8037..8264
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RPT9_TRIAD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDV28243.1}; TaxID=10228 species="Eukaryota; Metazoa; Placozoa; Trichoplax.;" source="Trichoplax adhaerens (Trichoplax reptans).;"
SCNpilot_expt_500_p_scaffold_475_9
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

8285..8848
DNA (564bp) protein (188aa)
PREDICTED: Dynein beta chain, ciliary-like isoform 2 n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBE6E
Uncharacterized protein {ECO:0000313|EMBL:ELT87666.1, ECO:0000313|EnsemblMetazoa:CapteP175142}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_475_10
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

9157..9435
DNA (279bp) protein (93aa)
Dynein beta chain, ciliary n=1 Tax=Crassostrea gigas RepID=K1PAG1_CRAGI
Dynein beta chain, ciliary {ECO:0000313|EMBL:EKC20777.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_475_11
Trichoplax adhaerens, Trichoplax, Placozoa, Metazoa

Not on your lists

9731..10084
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RPT9_TRIAD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDV28243.1}; TaxID=10228 species="Eukaryota; Metazoa; Placozoa; Trichoplax.;" source="Trichoplax adhaerens (Trichoplax reptans).;"
SCNpilot_expt_500_p_scaffold_475_12
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

10074..11090
DNA (1017bp) protein (339aa)
Dynein beta chain, ciliary n=1 Tax=Crassostrea gigas RepID=K1PAG1_CRAGI
Dynein beta chain, ciliary {ECO:0000313|EMBL:EKC20777.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_475_13
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

11119..12594
DNA (1476bp) protein (492aa)
PREDICTED: dynein beta chain, ciliary-like n=1 Tax=Aplysia californica RepID=UPI0003597A68
Dynein beta chain, ciliary {ECO:0000313|EMBL:EKC20777.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
dynein heavy chain 9, axonemal-like
SCNpilot_expt_500_p_scaffold_475_14
Xenopus (Silurana) tropicalis, Xenopus, Anura, Amphibia, Chordata, Metazoa

Not on your lists

12767..13168
DNA (402bp) protein (134aa)
Uncharacterized protein (Fragment) n=1 Tax=Xenopus tropicalis RepID=F6Y3Y6_XENTR
dynein heavy chain 9, axonemal-like
Uncharacterized protein {ECO:0000313|Ensembl:ENSXETP00000036462}; Flags: Fragment;; TaxID=8364 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.;" source="Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).;"
SCNpilot_expt_500_p_scaffold_475_15
Trichoplax adhaerens, Trichoplax, Placozoa, Metazoa

Not on your lists

13137..13406
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RPT9_TRIAD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDV28243.1}; TaxID=10228 species="Eukaryota; Metazoa; Placozoa; Trichoplax.;" source="Trichoplax adhaerens (Trichoplax reptans).;"
SCNpilot_expt_500_p_scaffold_475_16
Microplitis demolitor, Microplitis, Hymenoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

14265..14576
DNA (312bp) protein (104aa)
PREDICTED: Dynein beta chain, ciliary-like isoform 2 n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBE6E
dynein heavy chain at 93AB ortholog
Putative dynein heavy chain, ciliary-like protein {ECO:0000313|EMBL:EZA45086.1}; TaxID=69319 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Microgastrinae; Microplitis.;" source="Microplitis demolitor.;"
SCNpilot_expt_500_p_scaffold_475_17
Opisthorchis viverrini, Opisthorchis, Opisthorchiida, Digenea, Platyhelminthes, Metazoa

Not on your lists

14660..14998
DNA (339bp) protein (113aa)
Dynein beta chain ciliary n=1 Tax=Clonorchis sinensis RepID=H2KS24_CLOSI
Uncharacterized protein {ECO:0000313|EMBL:KER25251.1}; TaxID=6198 species="Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Opisthorchiida; Opisthorchiata; Opisthorchiidae; Opisthorchis.;" source="Opisthorchis viverrini.;"
dynein heavy chain
SCNpilot_expt_500_p_scaffold_475_18
Myotis brandtii, Myotis, Chiroptera, Mammalia, Chordata, Metazoa

Not on your lists

15088..15309
DNA (222bp) protein (74aa)
PREDICTED: dynein heavy chain 9, axonemal n=1 Tax=Zonotrichia albicollis RepID=UPI0003942421
mCG140381-like
Dynein heavy chain 9, axonemal {ECO:0000313|EMBL:EPQ13415.1}; TaxID=109478 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis.;" source="Myotis brandtii (Brandt's bat).;"
SCNpilot_expt_500_p_scaffold_475_19
Danaus plexippus, Danaus, Lepidoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

15422..15661
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Danaus plexippus RepID=G6CJI0_DANPL
Uncharacterized protein {ECO:0000313|EMBL:EHJ78599.1}; TaxID=13037 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Danainae; Danaini; Danaina; Danaus; Danaus.;" source="Danaus plexippus (Monarch butterfly).;"
dynein heavy chain
SCNpilot_expt_500_p_scaffold_475_20
Poecilia formosa, Poecilia, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

Not on your lists

15810..16142
DNA (333bp) protein (111aa)
Dynein beta chain ciliary n=1 Tax=Clonorchis sinensis RepID=H2KS24_CLOSI
Uncharacterized protein {ECO:0000313|Ensembl:ENSPFOP00000030747}; TaxID=48698 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia.;" source="Poecilia formosa (Amazon molly) (Limia formosa).;"
dynein heavy chain
SCNpilot_expt_500_p_scaffold_475_21
Petromyzon marinus, Petromyzon, Petromyzontiformes, Chordata, Metazoa

Not on your lists

16099..16353
DNA (255bp) protein (85aa)
Uncharacterized protein (Fragment) n=1 Tax=Petromyzon marinus RepID=S4RKD7_PETMA
Uncharacterized protein {ECO:0000313|Ensembl:ENSPMAP00000005670}; TaxID=7757 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon.;" source="Petromyzon marinus (Sea lamprey).;"
mCG140381-like
SCNpilot_expt_500_p_scaffold_475_22
Mus musculus, Mus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

16395..16637
DNA (243bp) protein (81aa)
PREDICTED: LOW QUALITY PROTEIN: dynein, axonemal, heavy chain 17, partial n=1 Tax=Tursiops truncatus RepID=UPI0002C3373F
dynein heavy chain 17, axonemal-like
Dynein heavy chain 17, axonemal {ECO:0000313|Ensembl:ENSMUSP00000120542}; Flags: Fragment;; TaxID=10090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.;" source="Mus musculus (Mouse).;"
SCNpilot_expt_500_p_scaffold_475_23
Chelonia mydas, Chelonia, Testudines, Chordata, Metazoa

Not on your lists

17163..17453
DNA (291bp) protein (97aa)
Dynein heavy chain 9, axonemal n=1 Tax=Chelonia mydas RepID=M7AV99_CHEMY
Dynein heavy chain 9, axonemal {ECO:0000313|EMBL:EMP23708.1}; TaxID=8469 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia.;" source="Chelonia mydas (Green sea-turtle) (Chelonia agassizi).;"
similar to dynein beta-heavy chain
SCNpilot_expt_500_p_scaffold_475_24
Myotis lucifugus, Myotis, Chiroptera, Mammalia, Chordata, Metazoa

Not on your lists

17515..17778
DNA (264bp) protein (88aa)
Uncharacterized protein (Fragment) n=1 Tax=Myotis lucifugus RepID=G1PVX8_MYOLU
Uncharacterized protein {ECO:0000313|Ensembl:ENSMLUP00000015525}; Flags: Fragment;; TaxID=59463 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis.;" source="Myotis lucifugus (Little brown bat).;"
dynein heavy chain 9, axonemal-like
SCNpilot_expt_500_p_scaffold_475_25
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

17954..18133
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3ISV8_STRPU
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_017271-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
dynein heavy chain
SCNpilot_expt_500_p_scaffold_475_26
Ciona savignyi, Ciona, Enterogona, Ascidiacea, Chordata, Metazoa

Not on your lists

18371..18781
DNA (411bp) protein (137aa)
Uncharacterized protein (Fragment) n=1 Tax=Ciona savignyi RepID=H2ZKB6_CIOSA
similar to dynein beta-heavy chain
Uncharacterized protein {ECO:0000313|Ensembl:ENSCSAVP00000018033}; TaxID=51511 species="Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona.;" source="Ciona savignyi (Pacific transparent sea squirt).;"
SCNpilot_expt_500_p_scaffold_475_27
Sarcophilus harrisii, Sarcophilus, Dasyuromorphia, Mammalia, Chordata, Metazoa

Not on your lists

18832..19197
DNA (366bp) protein (122aa)
Uncharacterized protein (Fragment) n=1 Tax=Sarcophilus harrisii RepID=G3VFA4_SARHA
dynein heavy chain 11, axonemal-like
Uncharacterized protein {ECO:0000313|Ensembl:ENSSHAP00000001858}; TaxID=9305 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus.;" source="Sarcophilus harrisii (Tasmanian devil) (Sarcophilus laniarius).;"
SCNpilot_expt_500_p_scaffold_475_28
Oncorhynchus mykiss, Oncorhynchus, Salmoniformes, Neopterygii, Chordata, Metazoa

Not on your lists

19269..19700
DNA (432bp) protein (144aa)
Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_34 n=1 Tax=Oikopleura dioica RepID=E4XGM4_OIKDI
Oncorhynchus mykiss genomic scaffold, scaffold_856 {ECO:0000313|EMBL:CDQ76311.1}; TaxID=8022 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.;" source="Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).;"
dynein heavy chain 9, axonemal-like
SCNpilot_expt_500_p_scaffold_475_29
Danio rerio, Danio, Cypriniformes, Neopterygii, Chordata, Metazoa

Not on your lists

19803..20927
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Danio rerio RepID=E7FAB2_DANRE
fj30b09; wu:fj30b09
Uncharacterized protein {ECO:0000313|Ensembl:ENSDARP00000110350}; TaxID=7955 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio.;" source="Danio rerio (Zebrafish) (Brachydanio rerio).;"
SCNpilot_expt_500_p_scaffold_475_30
unknown

Not on your lists

21080..21220
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying items 1-30 of 94 in total

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