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SCNpilot_expt_500_p_scaffold_539

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_539_1
unknown

Not on your lists

comp(2..403)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_2
Brachyspira pilosicoli, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

528..1163
DNA (636bp) protein (212aa)
adk; adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3]
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=759914 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira pi
adenylate kinase n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B45228
SCNpilot_expt_500_p_scaffold_539_3
unknown

Not on your lists

comp(1134..1931)
DNA (798bp) protein (266aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_4
unknown

Not on your lists

comp(2037..2243)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_5
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2400..3905)
DNA (1506bp) protein (502aa)
UPI0003CFBDB2 related cluster n=1 Tax=unknown RepID=UPI0003CFBDB2
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:KDA44189.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
SCNpilot_expt_500_p_scaffold_539_6
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

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4231..4698
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Aureococcus anophagefferens RepID=F0Y8V7_AURAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGB08452.1}; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anophagefferens (Harmful bloom alga).;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_539_7
Ixodes scapularis, Ixodes, Ixodida, Acari, Arthropoda, Metazoa

Not on your lists

4866..5843
DNA (978bp) protein (326aa)
methylmalonyl coenzyme A mutase, putative (EC:5.4.99.2 5.4.99.4); K01847 methylmalonyl-CoA mutase [EC:5.4.99.2]
Methylmalonyl coenzyme A mutase, putative {ECO:0000313|EMBL:EEC12682.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EEC12682.1};; EC=5.4.99.4 {ECO:0000313|EMBL:EEC12682.1};; TaxID=6945 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes.;" source="Ixodes scapularis (Black-legged tick) (Deer tick).;"
Methylmalonyl coenzyme A mutase, putative n=1 Tax=Ixodes scapularis RepID=B7Q1G1_IXOSC
SCNpilot_expt_500_p_scaffold_539_8
Daphnia pulex, Daphnia, Diplostraca, Phyllopoda, Arthropoda, Metazoa

Not on your lists

5807..6823
DNA (1017bp) protein (339aa)
methylmalonyl-CoA mutase, mitochondrial-like; K01847 methylmalonyl-CoA mutase [EC:5.4.99.2]
Putative uncharacterized protein n=1 Tax=Daphnia pulex RepID=E9FY35_DAPPU
Putative uncharacterized protein {ECO:0000313|EMBL:EFX87842.1}; TaxID=6669 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.;" source="Daphnia pulex (Water flea).;"
SCNpilot_expt_500_p_scaffold_539_9
Caenorhabditis elegans, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

7080..7283
DNA (204bp) protein (68aa)
mmcm-1; MethylMalonylCoA Mutase homolog family member (mmcm-1); K01847 methylmalonyl-CoA mutase [EC:5.4.99.2]
Probable methylmalonyl-CoA mutase, mitochondrial; EC=5.4.99.2;; MethylmalonylCoA mutase homolog 1; Short=MCM;; Flags: Precursor;; TaxID=6239 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis elegans.;"
CRE-MMCM-1 protein n=1 Tax=Caenorhabditis remanei RepID=E3M8G8_CAERE
SCNpilot_expt_500_p_scaffold_539_10
unknown

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8516..8758
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_11
Ficedula albicollis, Ficedula, Passeriformes, Aves, Chordata, Metazoa

Not on your lists

9016..9279
DNA (264bp) protein (88aa)
PREDICTED: d-3-phosphoglycerate dehydrogenase n=1 Tax=Jaculus jaculus RepID=UPI0003334832
PHGDH; phosphoglycerate dehydrogenase
Uncharacterized protein {ECO:0000313|Ensembl:ENSFALP00000003885}; TaxID=59894 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.;" source="Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).;"
SCNpilot_expt_500_p_scaffold_539_12
Anolis carolinensis, Anolis, Squamata, Chordata, Metazoa

Not on your lists

9519..9914
DNA (396bp) protein (132aa)
d-3-phosphoglycerate dehydrogenase-like; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
PREDICTED: phosphoglycerate dehydrogenase-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBB473
Uncharacterized protein {ECO:0000313|Ensembl:ENSACAP00000009805}; TaxID=28377 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Iguanidae; Polychrotinae; Anolis.;" source="Anolis carolinensis (Green anole) (American chameleon).;"
SCNpilot_expt_500_p_scaffold_539_13
unknown

Not on your lists

10178..10447
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_14
unknown

Not on your lists

10623..10730
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_15
unknown

Not on your lists

comp(10987..11136)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_16
unknown

Not on your lists

11468..11869
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_17
Xenopus (Silurana) tropicalis, Xenopus, Anura, Amphibia, Chordata, Metazoa

Not on your lists

11972..13087
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Xenopus tropicalis RepID=F7ASE7_XENTR
slc22a5; solute carrier family 22 (organic cation/carnitine transporter), member 5; K08202 MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Uncharacterized protein {ECO:0000313|Ensembl:ENSXETP00000036160}; TaxID=8364 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.;" source="Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).;"
SCNpilot_expt_500_p_scaffold_539_18
unknown

Not on your lists

comp(13502..13747)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_19
unknown

Not on your lists

comp(14375..14818)
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_20
unknown

Not on your lists

16731..16847
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_21
Aedes aegypti, Aedes, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(16923..18041)
DNA (1119bp) protein (373aa)
D1-like dopamine receptor n=2 Tax=Aedes aegypti RepID=H6D5H2_AEDAE
octopamine receptor oamb
AAEL005834-PA {ECO:0000313|EMBL:EAT42665.2}; Flags: Fragment;; TaxID=7159 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia.;" source="Aedes aegypti (Yellowfever mosquito) (Culex aegypti).;"
SCNpilot_expt_500_p_scaffold_539_22
Danaus plexippus, Danaus, Lepidoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

19181..19336
DNA (156bp) protein (52aa)
glutamate-cysteine ligase; K11204 glutamate--cysteine ligase catalytic subunit [EC:6.3.2.2]
Putative glutamate cysteine ligase isoform 1 n=1 Tax=Danaus plexippus RepID=G6CME9_DANPL
Putative glutamate cysteine ligase isoform 1 {ECO:0000313|EMBL:EHJ77580.1}; TaxID=13037 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Danainae; Danaini; Danaina; Danaus; Danaus.;" source="Danaus plexippus (Monarch butterfly).;"
SCNpilot_expt_500_p_scaffold_539_23
unknown

Not on your lists

20875..21018
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_24
Lygus hesperus, Lygus, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

21194..21781
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Daphnia pulex RepID=E9G6H2_DAPPU
Glutamate--cysteine ligase catalytic subunit {ECO:0000313|EMBL:JAG29075.1}; TaxID=30085 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Heteroptera; Panheteroptera; Cimicomorpha; Miridae; Mirini; Lygus.;" source="Lygus hesperus (Western plant bug).;"
similar to glutamate-cysteine ligase catalytic subunit
SCNpilot_expt_500_p_scaffold_539_25
unknown

Not on your lists

21958..22209
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_26
unknown

Not on your lists

22314..22484
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_27
Cerapachys biroi, Cerapachys, Hymenoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

22712..23014
DNA (303bp) protein (101aa)
Neuronal calcium sensor 2 n=2 Tax=Formicidae RepID=E2AUC1_CAMFO
GJ11589 gene product from transcript GJ11589-RA
Neuronal calcium sensor {ECO:0000313|EMBL:EZA47428.1}; TaxID=443821 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Formicidae; Cerapachyinae; Cerapachyini; Cerapachys.;" source="Cerapachys biroi (Ant).;"
SCNpilot_expt_500_p_scaffold_539_28
unknown

Not on your lists

23545..23811
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_539_29
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

24193..24708
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Crassostrea gigas RepID=K1RAV3_CRAGI
Uncharacterized protein {ECO:0000313|EMBL:EKC42868.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
tumor susceptibility gene 101 protein-like
SCNpilot_expt_500_p_scaffold_539_30
Otolemur garnettii, Otolemur, Primates, Mammalia, Chordata, Metazoa

Not on your lists

24804..25109
DNA (306bp) protein (102aa)
PREDICTED: tumor susceptibility gene 101 protein n=1 Tax=Octodon degus RepID=UPI000333BBF8
Uncharacterized protein {ECO:0000313|Ensembl:ENSOGAP00000008296}; TaxID=30611 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur.;" source="Otolemur garnettii (Small-eared galago) (Garnett's greater bushbaby).;"
Tsg101; tumor susceptibility gene 101
Displaying items 1-30 of 52 in total

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