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SCNpilot_expt_500_p_scaffold_776

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_776_1
unknown

Not on your lists

comp(2100..2291)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_2
Dugesia japonica, Dugesia, Tricladida, Platyhelminthes, Metazoa

Not on your lists

comp(2376..2564)
DNA (189bp) protein (63aa)
Transient receptor potential cation channel subfamily V member 6 n=1 Tax=Crassostrea gigas RepID=K1Q1L6_CRAGI
Transient receptor potential ion channel V a {ECO:0000313|EMBL:BAP40096.1}; Flags: Fragment;; TaxID=6161 species="Eukaryota; Metazoa; Platyhelminthes; Rhabditophora; Seriata; Tricladida; Continenticola; Geoplanoidea; Dugesiidae; Dugesia.;" source="Dugesia japonica (Planarian).;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_776_3
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(2621..2965)
DNA (345bp) protein (115aa)
Transient receptor potential cation channel subfamily V member 6 n=1 Tax=Crassostrea gigas RepID=K1Q1L6_CRAGI
Transient receptor potential cation channel subfamily V member 6 {ECO:0000313|EMBL:EKC27818.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_p_scaffold_776_4
unknown

Not on your lists

comp(3310..3738)
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_5
unknown

Not on your lists

comp(4057..4161)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_6
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(4158..4493)
DNA (336bp) protein (112aa)
Transient receptor potential cation channel subfamily V member 6 n=1 Tax=Crassostrea gigas RepID=K1Q1L6_CRAGI
Transient receptor potential cation channel subfamily V member 6 {ECO:0000313|EMBL:EKC27818.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
transient receptor potential cation channel subfamily V member 6-like
SCNpilot_expt_500_p_scaffold_776_7
unknown

Not on your lists

comp(4860..5117)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_8
unknown

Not on your lists

comp(5114..5284)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_9
unknown

Not on your lists

comp(5901..6077)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_10
unknown

Not on your lists

comp(6092..6349)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_11
Cylindrobasidium torrendii, Cylindrobasidium, Corticiales, Agaricomycetes, Basidiomycota, Fungi

Not on your lists

comp(6777..7550)
DNA (774bp) protein (258aa)
PREDICTED: mucin-5AC-like n=1 Tax=Xenopus tropicalis RepID=UPI00034F8891
Uncharacterized protein {ECO:0000313|EMBL:KIY64819.1}; TaxID=1314674 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Corticiales; Corticiaceae; Cylindrobasidium.;" source="Cylindrobasidium torrendii FP15055 ss-10.;"
SCNpilot_expt_500_p_scaffold_776_12
unknown

Not on your lists

comp(8123..8611)
DNA (489bp) protein (163aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_13
Corvus brachyrhynchos, Corvus, Passeriformes, Aves, Chordata, Metazoa

Not on your lists

comp(10096..11166)
DNA (1071bp) protein (357aa)
peptidase M20 domain containing 1; K13049 carboxypeptidase PM20D1 [EC:3.4.17.-]
PREDICTED: probable carboxypeptidase PM20D1 n=1 Tax=Pseudopodoces humilis RepID=UPI000395ADE7
Putative carboxypeptidase PM20D1 {ECO:0000313|EMBL:KFO55047.1}; Flags: Fragment;; TaxID=85066 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.;" source="Corvus brachyrhynchos (American crow).;"
SCNpilot_expt_500_p_scaffold_776_14
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

Not on your lists

comp(11314..11799)
DNA (486bp) protein (162aa)
PREDICTED: probable carboxypeptidase PM20D1.2-like n=1 Tax=Aplysia californica RepID=UPI000359D1B6
Uncharacterized protein {ECO:0000313|EMBL:CEK67474.1}; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupulmonata; Stylommatophora; Sigmurethra; Arionoidea; Arionidae; Arion.;" source="Arion vulgaris.;"
peptidase M20 family protein
SCNpilot_expt_500_p_scaffold_776_15
unknown

Not on your lists

12129..12596
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_16
Latimeria chalumnae, Latimeria, Coelacanthiformes, Chordata, Metazoa

Not on your lists

comp(12758..12982)
DNA (225bp) protein (75aa)
threonyl-tRNA synthetase ; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
PREDICTED: threonine--tRNA ligase, cytoplasmic-like n=1 Tax=Latimeria chalumnae RepID=UPI0003C10A09
Uncharacterized protein {ECO:0000313|Ensembl:ENSLACP00000009891}; TaxID=7897 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria.;" source="Latimeria chalumnae (West Indian ocean coelacanth).;"
SCNpilot_expt_500_p_scaffold_776_17
Amblyomma triste, Amblyomma, Ixodida, Acari, Arthropoda, Metazoa

Not on your lists

comp(13418..13714)
DNA (297bp) protein (99aa)
threonyl-tRNA synthetase, putative (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonyl-tRNA synthetase, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7QAM0_IXOSC
Putative threonyl-trna synthetase {ECO:0000313|EMBL:JAC34837.1}; Flags: Fragment;; TaxID=251400 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Amblyomminae; Amblyomma.;" source="Amblyomma triste.;"
SCNpilot_expt_500_p_scaffold_776_18
Taeniopygia guttata, Taeniopygia, Passeriformes, Aves, Chordata, Metazoa

Not on your lists

comp(13790..13957)
DNA (168bp) protein (56aa)
similar to probable threonyl-tRNA synthetase 2, cytoplasmic; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
PREDICTED: probable threonine--tRNA ligase 2, cytoplasmic-like, partial n=1 Tax=Taeniopygia guttata RepID=UPI0002B4C875
Uncharacterized protein {ECO:0000313|Ensembl:ENSTGUP00000005949}; Flags: Fragment;; TaxID=59729 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.;" source="Taeniopygia guttata (Zebra finch) (Poephila guttata).;"
SCNpilot_expt_500_p_scaffold_776_19
unknown

Not on your lists

comp(14794..14922)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_20
Zootermopsis nevadensis, Zootermopsis, Isoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(15007..15249)
DNA (243bp) protein (81aa)
threonyl-tRNA synthetase, cytoplasmic-like; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like n=1 Tax=Acyrthosiphon pisum RepID=UPI00020616F3
Threonyl-tRNA synthetase, cytoplasmic {ECO:0000313|EMBL:KDR13507.1}; TaxID=136037 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Orthopteroidea; Dictyoptera; Isoptera; Termopsidae; Zootermopsis.;" source="Zootermopsis nevadensis (Dampwood termite).;"
SCNpilot_expt_500_p_scaffold_776_21
Corethrella appendiculata, Corethrella, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(16228..16734)
DNA (507bp) protein (169aa)
AGAP006943-PA; K03372 MFS transporter, PAT family, solute carrier family 33 (acetyl-CoA transportor), member 1 [EC:2.3.1.-]
Putative acetyl-coa transporter n=1 Tax=Corethrella appendiculata RepID=U5EUI4_9DIPT
Putative acetyl-coa transporter {ECO:0000313|EMBL:JAB57567.1}; TaxID=1370023 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Chaoboridae; Corethrella.;" source="Corethrella appendiculata.;"
SCNpilot_expt_500_p_scaffold_776_22
Dendroctonus ponderosae, Dendroctonus, Coleoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(17611..18087)
DNA (477bp) protein (159aa)
GI13371 gene product from transcript GI13371-RA; K03372 MFS transporter, PAT family, solute carrier family 33 (acetyl-CoA transportor), member 1 [EC:2.3.1.-]
Uncharacterized protein n=1 Tax=Dendroctonus ponderosae RepID=U4U7X4_DENPD
Uncharacterized protein {ECO:0000313|EMBL:ENN71246.1, ECO:0000313|EnsemblMetazoa:ENN71246}; Flags: Fragment;; TaxID=77166 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Scolytinae; Dendroctonus.;" source="Dendroctonus ponderosae (Mountain pine beetle).;"
SCNpilot_expt_500_p_scaffold_776_23
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

Not on your lists

19796..20110
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4BSX7_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO92194.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
SCNpilot_expt_500_p_scaffold_776_24
unknown

Not on your lists

20161..20388
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_25
unknown

Not on your lists

20467..20778
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_26
Nasonia vitripennis, Nasonia, Hymenoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

21895..22383
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Nasonia vitripennis RepID=K7IZX8_NASVI
NV14657; glutamate receptor, ionotropic kainate 2-like
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:NV14657-PA}; TaxID=7425 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia.;" source="Nasonia vitripennis (Parasitic wasp).;"
SCNpilot_expt_500_p_scaffold_776_27
Homo sapiens, Homo, Primates, Mammalia, Chordata, Metazoa

Not on your lists

22347..22592
DNA (246bp) protein (82aa)
GRIK4 protein n=1 Tax=Homo sapiens RepID=A6H8K8_HUMAN
GRIK4; glutamate receptor, ionotropic, kainate 4
GRIK4 protein {ECO:0000313|EMBL:AAI46653.1}; TaxID=9606 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.;" source="Homo sapiens (Human).;"
SCNpilot_expt_500_p_scaffold_776_28
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

Not on your lists

22589..22936
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7UZF4_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:CEK64078.1}; Flags: Fragment;; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupulmonata; Stylommatophora; Sigmurethra; Arionoidea; Arionidae; Arion.;" source="Arion vulgaris.;"
EAA5, putative
SCNpilot_expt_500_p_scaffold_776_29
unknown

Not on your lists

22933..23058
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_776_30
unknown

Not on your lists

comp(23800..25314)
DNA (1515bp) protein (505aa)

This feature has no annotations

Displaying items 1-30 of 68 in total

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