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SCNpilot_expt_500_p_scaffold_928

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_928_1
Papio anubis, Papio, Primates, Mammalia, Chordata, Metazoa

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3..251
DNA (249bp) protein (83aa)
Actin beta/gamma 1 n=1 Tax=Clonorchis sinensis RepID=G7YCA9_CLOSI
Uncharacterized protein {ECO:0000313|Ensembl:ENSPANP00000016331}; TaxID=9555 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio.;" source="Papio anubis (Olive baboon).;"
actin, cytoplasmic type 5-like; K05692 actin beta/gamma 1
SCNpilot_expt_500_p_scaffold_928_2
Campylomormyrus compressirostris, Campylomormyrus, Osteoglossiformes, Neopterygii, Chordata, Metazoa

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229..552
DNA (324bp) protein (108aa)
Cytoplasmic actin n=1 Tax=Oikopleura longicauda RepID=Q9U8M1_9UROC
Cytoplasmic 1 actin {ECO:0000313|EMBL:AHI42556.1}; TaxID=389352 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Mormyridae; Campylomormyrus.;" source="Campylomormyrus compressirostris.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_928_3
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

1297..2061
DNA (765bp) protein (255aa)
chpf; chondroitin polymerizing factor; K00747 chondroitin polymerizing factor [EC:2.4.1.175 2.4.1.226]
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7TAR8_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELT90607.1, ECO:0000313|EnsemblMetazoa:CapteP220988}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
SCNpilot_expt_500_p_scaffold_928_4
unknown

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2115..2273
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_5
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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2545..2850
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4AXE2_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESP02248.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
CHPF; chondroitin polymerizing factor
SCNpilot_expt_500_p_scaffold_928_6
Poecilia formosa, Poecilia, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

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2940..4004
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Xiphophorus maculatus RepID=M3ZN39_XIPMA
Uncharacterized protein {ECO:0000313|Ensembl:ENSPFOP00000008319}; TaxID=48698 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia.;" source="Poecilia formosa (Amazon molly) (Limia formosa).;"
chondroitin sulfate synthase 2-like
SCNpilot_expt_500_p_scaffold_928_7
unknown

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comp(4146..4433)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_8
unknown

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comp(4418..5080)
DNA (663bp) protein (221aa)
SCO-spondin-like
SCNpilot_expt_500_p_scaffold_928_9
unknown

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5169..5717
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_10
unknown

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comp(5676..5924)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_11
unknown

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comp(5930..10990)
DNA (5061bp) protein (1687aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_12
Xenopus (Silurana) tropicalis, Xenopus, Anura, Amphibia, Chordata, Metazoa

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comp(11658..13913)
DNA (2256bp) protein (752aa)
Uncharacterized protein (Fragment) n=1 Tax=Xenopus tropicalis RepID=F6SSQ4_XENTR rbh
Uncharacterized protein {ECO:0000313|Ensembl:ENSXETP00000062340}; Flags: Fragment;; TaxID=8364 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.;" source="Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).;"
SCO-spondin-like rbh
SCNpilot_expt_500_p_scaffold_928_13
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

comp(13995..14294)
DNA (300bp) protein (100aa)
SCO-spondin protein (Fragment) n=2 Tax=Strongylocentrotus purpuratus RepID=B3LF41_STRPU
SCO-spondin protein {ECO:0000313|EMBL:CAL69034.1}; Flags: Fragment;; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
SCO-spondin-like
SCNpilot_expt_500_p_scaffold_928_14
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

comp(14739..14975)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=3 Tax=Branchiostoma floridae RepID=C3Z8P2_BRAFL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN51147.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_p_scaffold_928_15
unknown

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comp(15396..15731)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_16
unknown

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16326..16514
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_17
unknown

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comp(16913..17098)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_18
Strongyloides ratti, Strongyloides, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(17266..17721)
DNA (456bp) protein (152aa)
tpst1, fj54g11, wu:fj54g11; tyrosylprotein sulfotransferase 1 (EC:2.8.2.20); K01021 protein-tyrosine sulfotransferase [EC:2.8.2.20]
PREDICTED: protein-tyrosine sulfotransferase 1 isoform X1 n=1 Tax=Danio rerio RepID=UPI000383754A
P-loop containing nucleoside triphosphate hydrolase domain-containing protein {ECO:0000313|EMBL:CEF65082.1}; TaxID=34506 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Panagrolaimoidea; Strongyloididae; Strongyloides.;" source="Strongyloides ratti (Parasitic roundworm).;"
SCNpilot_expt_500_p_scaffold_928_19
Caenorhabditis elegans, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

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comp(17782..18177)
DNA (396bp) protein (132aa)
tpst-1; TyrosylProtein SulfoTransferase family member (tpst-1); K01021 protein-tyrosine sulfotransferase [EC:2.8.2.20]
Protein-tyrosine sulfotransferase A; EC=2.8.2.20;; Tyrosylprotein sulfotransferase A; Short=TPST-A;; TaxID=6239 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis elegans.;"
Protein-tyrosine sulfotransferase A n=1 Tax=Caenorhabditis elegans RepID=TPSTA_CAEEL
SCNpilot_expt_500_p_scaffold_928_20
unknown

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18378..20051
DNA (1674bp) protein (558aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_21
unknown

Not on your lists

comp(20300..20515)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_22
unknown

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comp(21333..21641)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_23
unknown

Not on your lists

21723..21908
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_24
unknown

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comp(21876..22178)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_25
unknown

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comp(22150..22473)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_26
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

comp(23337..23516)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7TEE5_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELT89436.1, ECO:0000313|EnsemblMetazoa:CapteP101633}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
sgsm2; small G protein signaling modulator 2
SCNpilot_expt_500_p_scaffold_928_27
unknown

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comp(23590..23757)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_28
unknown

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comp(23965..24204)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_928_29
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

comp(24619..25158)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3IDX6_STRPU
similar to OTTHUMP00000028774
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_012284-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
SCNpilot_expt_500_p_scaffold_928_30
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

comp(25337..25558)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3IDX6_STRPU
similar to OTTHUMP00000028774
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_012284-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
Displaying items 1-30 of 35 in total

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