name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_p_scaffold_220_31
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34622..35689)
|
Regulatory protein, RpfE type n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLX1_9PROT
rbh
Regulatory protein, RpfE type {ECO:0000313|EMBL:CCU63688.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_220_32
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(35917..37296)
|
TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL81_9PROT
rbh
TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex {ECO:0000313|EMBL:CCU63687.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
peptidase U62, modulator of DNA gyrase; K03592 PmbA protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_220_33
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37412..37957
|
FIG138315: Putative alpha helix protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWQ8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49298.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K09889 ribosome-associated protein
|
|
SCNpilot_expt_500_p_scaffold_220_34
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37984..39090)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLW7_9PROT
rbh
Transglutaminase {ECO:0000313|EMBL:KIO49297.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
transglutaminase-like protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_220_35
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
39190..39876
|
Phospholipase/Carboxylesterase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL78_9PROT
rbh
Carboxylesterase {ECO:0000313|EMBL:KIO49296.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
phospholipase/carboxylesterase; K06999 phospholipase/carboxylesterase
|
|
SCNpilot_expt_500_p_scaffold_220_36
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
40169..40633
|
Response regulator receiver domain protein (CheY-like) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJS1_9PROT
Response regulator receiver protein {ECO:0000313|EMBL:KIO49295.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
response regulator receiver domain-containing protein
|
|
SCNpilot_expt_500_p_scaffold_220_37
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
40661..42160
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWQ0_9PROT
rbh
periplasmic sensor signal transduction histidine kinase
rbh
|
|
SCNpilot_expt_500_p_scaffold_220_38
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(42216..42371)
|
Isrso8-transposase orfb protein n=3 Tax=Burkholderia pseudomallei RepID=I1WW13_BURPE
integrase core domain protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
|
|
SCNpilot_expt_500_p_scaffold_220_39
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(42415..42654)
|
PilT protein domain-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2F6_9PROT
PilT protein domain-containing protein
PilT protein domain-containing protein {ECO:0000313|EMBL:BAN34852.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
SCNpilot_expt_500_p_scaffold_220_40
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(42774..42986)
|
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFY0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO36084.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_220_41
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(43403..43942)
|
Class I peptide chain release factor n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6C3_NITMU
class I peptide chain release factor; K15034 ribosome-associated protein
Class I peptide chain release factor {ECO:0000313|EMBL:ABB75698.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_expt_500_p_scaffold_220_42
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(43950..44834)
|
NAD-dependent epimerase/dehydratase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6C4_NITMU
rbh
NAD-dependent dehydratase {ECO:0000313|EMBL:KIO49292.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
NAD-dependent epimerase/dehydratase
rbh
|
|
SCNpilot_expt_500_p_scaffold_220_43
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(44922..45845)
|
dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJR8_9PROT
rbh
dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL {ECO:0000313|EMBL:CCU63676.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
glycosyl transferase family 2
rbh
|
|
SCNpilot_expt_500_p_scaffold_220_44
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(46038..46595)
|
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GHB3_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ01364.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
|
|
SCNpilot_expt_500_p_scaffold_220_45
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(47036..47623)
|
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-6.;"
D,D-heptose 1,7-bisphosphate phosphatase; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2M4_DESAT
|
|
SCNpilot_expt_500_p_scaffold_220_46
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(47620..48312)
|
nucleotidyl transferase; K15669 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
Nucleotidyl transferase n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AJM4_NITEC
Dehydrogenase {ECO:0000313|EMBL:KHD20809.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
|
|
SCNpilot_expt_500_p_scaffold_220_47
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(48312..48908)
|
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
gmhA; phosphoheptose isomerase (EC:5.3.1.28)
Phosphoheptose isomerase n=3 Tax=Burkholderia pseudomallei RepID=S5PBK4_BURPE
|
|
SCNpilot_expt_500_p_scaffold_220_48
R_Proteobacteria_53_8, Proteobacteria, Bacteria
|
Not on your lists |
comp(48896..49945)
|
Putative kinase, galactokinase/mevalonate kinase n=1 Tax=Pseudomonas sp. GM41(2012) RepID=J2RXB3_9PSED
rbh
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
|
|
SCNpilot_expt_500_p_scaffold_220_49
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(49942..51237)
|
glycosyl transferase family protein n=1 Tax=Acetobacter aceti RepID=UPI000225FECD
Glycosyl transferase {ECO:0000313|EMBL:KDP87526.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
group 1 glycosyl transferase
|
|
SCNpilot_expt_500_p_scaffold_220_50
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(51373..54600)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS00_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31224.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
family 2 glycosyl transferase
|
|
SCNpilot_expt_500_p_scaffold_220_51
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(55356..56702)
|
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNS1_MESCW
rbh
Uncharacterized protein {ECO:0000313|EMBL:KFB74471.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_220_52
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(56699..58861)
|
macrocin-O-methyltransferase; K05303 O-methyltransferase [EC:2.1.1.-]
Macrocin-O-methyltransferase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I1R4_RHOVT
Macrocin-O-methyltransferase {ECO:0000313|EMBL:KAI95166.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
|
|
SCNpilot_expt_500_p_scaffold_220_53
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(58936..59733)
|
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C4D0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS71613.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
|
|
SCNpilot_expt_500_p_scaffold_220_54
unknown
|
Not on your lists |
comp(60157..60441)
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_220_55
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(60935..61690)
|
Polysaccharide ABC transporter, ATP-binding protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWM5_9PROT
rbh
Polysaccharide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CCU63665.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
ABC transporter-like protein; K09691 lipopolysaccharide transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_220_56
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(61695..62477)
|
O-antigen export system permease protein RfbD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL36_9PROT
rbh
O-antigen export system permease protein RfbD {ECO:0000313|EMBL:CCU63664.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
putative O-antigen export system permease protein rfbD
rbh
|
|
SCNpilot_expt_500_p_scaffold_220_57
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
63099..63293
|
BFD domain protein (2Fe-2S)-binding domain protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GKA5_NITSI
(2Fe-2S)-binding protein {ECO:0000313|EMBL:AKH37118.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
BFD domain-containing protein (2Fe-2S)-binding domain-containing protein; K02192 bacterioferritin-associated ferredoxin
|
|
SCNpilot_expt_500_p_scaffold_220_58
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
63346..64329
|
ferroxidase (EC:1.16.3.1)
rbh
Multicopper oxidase pseudogene n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLM3_9PROT
rbh
Copper oxidase {ECO:0000313|EMBL:KIO49283.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_expt_500_p_scaffold_220_59
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
64366..65013
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKW6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63574.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_220_60
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
65010..65723
|
Probable transmembrane protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW77_9PROT
rbh
Peptidase {ECO:0000313|EMBL:KIO49281.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
PepSY-associated TM helix-containing protein; K09939 hypothetical protein
rbh
|