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SCNpilot_expt_500_p_scaffold_220_31

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 50 / 55 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: comp(34622..35689)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein, RpfE type n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLX1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 345.0
  • Bit_score: 431
  • Evalue 1.00e-117
  • rbh
Regulatory protein, RpfE type {ECO:0000313|EMBL:CCU63688.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 345.0
  • Bit_score: 431
  • Evalue 1.50e-117
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 348.0
  • Bit_score: 389
  • Evalue 1.10e-105
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
TTGTTCAGCGCTTCCCTACACTACTCCATGCACCTTCATCTGCTTATTCCTTCGCTTTTCTGGCCAGACTCCTCCCTGACAGGGATATACCAGGATCTGTCCCTACCTGCGCTGGAAGGGCTGCTGTCAAAAGGTGCCGTCGAGGAGGGAAGAATCCGGGAAGTCGAAGCCTGGCTTTGCGACACCTTTGGAATTGCAAAACAGCAGGACTGGCCGGTTGCGCCCATCACGCTTAAGGCCGATGGGCGGGAAATTGGCAAAACGGATCATGGCTACTGGCTTCGCGCCGATCCGGTCCATCTCCATATCGAGCGCGATCAGCTCCTGCTGGCGGATAGCCGTGTTTTCCGGATTACTCCGGCGGAAGCCGAGGAGCTCACCACTGCCCTGAACAGGCATTTTGCTGAAAGCTGCCCTGAAATAGCATTCCTGCCGCTTCATCCGGCTCGCTGGTATATCTGCCTCCAGGATATCCCTCCGCCACAAACTCACCTGTTGAGCGAGGTCGTAAACAAAGGAGTTCGCGAACTGTTGCCATACGGCGAAAGTTCCGGGACCTGGCGCAAGCTCTTCAACGAAACGCAGATGCTGCTGCATGAACAGCCGCTCAACCGCGTGCGGGAGGCCAATGGAGCACCTCTCATCAATAGTATCTGGTTCTGGGGAGGGGGAATCATGCCTGTATCCTTTCAGAGCGACTATACCCATGTATGGGGCAACCATATCCTTGCCCAGGCCCTAGCACTCTCTTGCGGCGCCCGGTATTCCGCGCTACCGCTTGAAGCCACCGTGCTGCATGGGACCTCCCCTTCTGACAAACACCTTGTCGTACTCGACTCCCTGGAGGGGAAGGCGTCCTATTCAGATGCGTATGGCTGGCGCGAAAGCCTCAAGGAGCTCGAAAAACACTGGTTTCAGCCTCTTTTCGCCATGGTAAAACAGGGCAAACTTCACCAGCTGAAGCTTTCGGTCCTCGGAAAAAAAGGGAATAAGGATTTCACGATAAGATCCGGGGACATGAAAAAATTCTGGCGCACGACAAAACCGATCTCTGTCCACGCGGACTGA
PROTEIN sequence
Length: 356
LFSASLHYSMHLHLLIPSLFWPDSSLTGIYQDLSLPALEGLLSKGAVEEGRIREVEAWLCDTFGIAKQQDWPVAPITLKADGREIGKTDHGYWLRADPVHLHIERDQLLLADSRVFRITPAEAEELTTALNRHFAESCPEIAFLPLHPARWYICLQDIPPPQTHLLSEVVNKGVRELLPYGESSGTWRKLFNETQMLLHEQPLNRVREANGAPLINSIWFWGGGIMPVSFQSDYTHVWGNHILAQALALSCGARYSALPLEATVLHGTSPSDKHLVVLDSLEGKASYSDAYGWRESLKELEKHWFQPLFAMVKQGKLHQLKLSVLGKKGNKDFTIRSGDMKKFWRTTKPISVHAD*