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SCNPILOT_EXPT_750_BF_Myxococcales_68_20

SCNPILOT_EXPT_500_P_Proteobacteria_68_2
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 2.31 Longest contig: 2.50 Kbp Bin length: 758.00 Kbp GC content: 68.12 %
Contigs count: 596 Features count: 1082 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 2 / 55 BSCG 3 / 51 ASCG 1 / 38
Displaying items 201-250 of 596 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_33467
Species: Sorangium cellulosum (50%)
2 1609 bp 69.67 3.11 90.99
SCNpilot_expt_500_p_scaffold_46404
Species: uncultured bacterium A1Q1_fos_1807 (50%)
2 1199 bp 66.06 2.50 100.08
SCNpilot_expt_500_p_scaffold_55989
Species: Chlorobium sp. GBChlB (50%)
2 1021 bp 73.65 1.47 100.20
SCNpilot_expt_500_p_scaffold_37927
Species: Sandaracinus amylolyticus (50%)
2 1434 bp 69.39 2.09 84.31
SCNpilot_expt_500_p_scaffold_55734
Species: Myxococcus fulvus (50%)
2 1025 bp 67.80 1.46 94.83
SCNpilot_expt_500_p_scaffold_52414
Species: Herbaspirillum sp. YR522 (50%)
2 1080 bp 68.80 1.00 99.72
SCNpilot_expt_500_p_scaffold_54905
Species: Mycobacterium vulneris (50%)
2 1038 bp 66.96 1.93 104.91
SCNpilot_expt_500_p_scaffold_55738
Species: Sorangium cellulosum (50%)
2 1025 bp 68.29 1.46 98.34
SCNpilot_expt_500_p_scaffold_43131
Species: Stigmatella aurantiaca (50%)
2 1277 bp 65.94 1.57 71.18
SCNpilot_expt_500_p_scaffold_37165
Species: Geobacter metallireducens (50%)
2 1461 bp 67.08 2.40 70.02
SCNpilot_expt_500_p_scaffold_56044
Species: Candidatus Methylomirabilis oxyfera (50%)
2 1021 bp 70.42 3.92 88.44
SCNpilot_expt_500_p_scaffold_52676
Species: Sandaracinus amylolyticus (50%)
2 1075 bp 69.95 2.79 85.67
SCNpilot_expt_500_p_scaffold_38816
Species: Corallococcus coralloides (50%)
2 1402 bp 65.19 2.67 55.63
SCNpilot_expt_500_p_scaffold_53471
Species: Sorangium cellulosum (50%)
2 1062 bp 67.51 1.00 97.46
SCNpilot_expt_500_p_scaffold_51112 2 1104 bp 68.39 1.81 98.91
SCNpilot_expt_500_p_scaffold_29090
Species: Verrucomicrobia bacterium IMCC26134 (50%)
2 1829 bp 69.00 1.37 88.90
SCNpilot_expt_500_p_scaffold_57329
Species: Sorangium cellulosum (50%)
2 1001 bp 72.73 3.00 74.33
SCNpilot_expt_500_p_scaffold_49353
Species: Corallococcus coralloides (50%)
2 1137 bp 70.54 2.64 96.83
SCNpilot_expt_500_p_scaffold_32963
Species: RBG_16_Deltaproteobacteria_71_12_curated (50%)
2 1633 bp 67.42 2.14 95.35
SCNpilot_expt_500_p_scaffold_55490
Species: Chondromyces apiculatus (100%)
2 1029 bp 67.06 2.92 98.54
SCNpilot_expt_500_p_scaffold_44538
Species: Rhodopseudomonas palustris (50%)
2 1242 bp 66.59 2.42 63.53
SCNpilot_expt_500_p_scaffold_49611
Species: Sorangium cellulosum (50%)
2 1132 bp 69.17 2.21 94.35
SCNpilot_expt_500_p_scaffold_55236
Species: Sorangium cellulosum (50%)
2 1033 bp 72.70 4.36 83.35
SCNpilot_expt_500_p_scaffold_45964
Species: Chondromyces apiculatus (50%)
2 1208 bp 68.79 2.07 87.91
SCNpilot_expt_500_p_scaffold_53221
Species: Sorangium cellulosum (50%)
2 1066 bp 67.07 4.22 98.78
SCNpilot_expt_500_p_scaffold_31279
Species: Sorangium cellulosum (50%)
2 1713 bp 68.94 1.75 95.10
SCNpilot_expt_500_p_scaffold_56566
Species: Sorangium cellulosum (100%)
2 1012 bp 66.01 1.48 98.12
SCNpilot_expt_500_p_scaffold_44032 2 1254 bp 70.49 2.39 84.93
SCNpilot_expt_500_p_scaffold_53224
Species: Sorangium cellulosum (50%)
2 1066 bp 66.70 2.35 94.28
SCNpilot_expt_500_p_scaffold_37690
Species: Pseudomonas sp. FeS53a (50%)
2 1442 bp 69.07 2.77 77.81
SCNpilot_expt_500_p_scaffold_52945
Species: Chondromyces apiculatus (50%)
2 1071 bp 68.16 2.33 78.15
SCNpilot_expt_500_p_scaffold_55755
Species: Chondromyces apiculatus (50%)
2 1025 bp 62.34 1.95 97.46
SCNpilot_expt_500_p_scaffold_41844
Species: Myxococcus stipitatus (50%)
2 1311 bp 67.58 1.14 100.00
SCNpilot_expt_500_p_scaffold_57086
Species: Pyrinomonas methylaliphatogenes (50%)
2 1004 bp 66.43 1.99 100.70
SCNpilot_expt_500_p_scaffold_54159
Species: Sandaracinus amylolyticus (50%)
2 1051 bp 68.60 2.38 84.49
SCNpilot_expt_500_p_scaffold_26649
Species: Anaeromyxobacter dehalogenans (50%)
2 1981 bp 67.09 1.51 84.81
SCNpilot_expt_500_p_scaffold_55761
Species: Sorangium cellulosum (50%)
2 1025 bp 63.90 1.46 87.51
SCNpilot_expt_500_p_scaffold_56833
Species: Sandaracinus amylolyticus (50%)
2 1009 bp 67.39 1.00 89.49
SCNpilot_expt_500_p_scaffold_41594
Species: Pseudomonas mendocina (50%)
2 1318 bp 67.37 1.00 77.85
SCNpilot_expt_500_p_scaffold_51387 2 1099 bp 72.79 2.50 92.27
SCNpilot_expt_500_p_scaffold_55764
Species: Myxococcus fulvus (50%)
2 1591 bp 68.13 1.89 98.99
SCNpilot_expt_500_p_scaffold_45980
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1208 bp 65.98 1.66 84.44
SCNpilot_expt_500_p_scaffold_39950
Species: Hydrocarboniphaga effusa (50%)
2 1366 bp 66.40 1.10 91.14
SCNpilot_expt_500_p_scaffold_43925 2 1256 bp 69.35 2.39 62.82
SCNpilot_expt_500_p_scaffold_50397
Species: Ilumatobacter coccineus (50%)
2 1117 bp 67.95 3.13 100.18
SCNpilot_expt_500_p_scaffold_34319
Species: Sulfuritalea hydrogenivorans (50%)
2 1572 bp 69.85 1.00 78.82
SCNpilot_expt_500_p_scaffold_34575
Species: RIFOXYB2_FULL_Elusimicrobia_62_6_curated (50%)
2 1560 bp 68.91 2.56 90.38
SCNpilot_expt_500_p_scaffold_35408
Species: Ilumatobacter coccineus (50%)
2 1527 bp 69.42 2.29 100.20
SCNpilot_expt_500_p_scaffold_54679
Species: Salinivibrio sp. KP-1 (50%)
2 1042 bp 68.71 3.36 80.04
SCNpilot_expt_500_p_scaffold_51648
Species: Aphanomyces invadans (50%)
2 1094 bp 70.48 1.37 95.98
Displaying items 201-250 of 596 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.