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SCNPILOT_EXPT_750_BF_Myxococcales_68_20

SCNPILOT_EXPT_500_P_Proteobacteria_68_2
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 2.31 Longest contig: 2.50 Kbp Bin length: 758.00 Kbp GC content: 68.12 %
Contigs count: 596 Features count: 1082 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 2 / 55 BSCG 3 / 51 ASCG 1 / 38
Displaying items 251-300 of 596 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_40627
Species: Sandaracinus amylolyticus (50%)
2 1347 bp 68.82 1.67 95.77
SCNpilot_expt_500_p_scaffold_42028 2 1306 bp 69.91 1.53 99.69
SCNpilot_expt_500_p_scaffold_51653
Species: Thalassiosira oceanica (50%)
2 1094 bp 71.85 1.37 57.04
SCNpilot_expt_500_p_scaffold_45733
Species: CG_Delta_07 (50%)
2 1213 bp 62.90 2.06 100.16
SCNpilot_expt_500_p_scaffold_36167
Species: Chondromyces apiculatus (50%)
2 1498 bp 67.16 2.00 73.10
SCNpilot_expt_500_p_scaffold_41606
Species: GWA2_Rokubacteria_73_35_curated (50%)
2 1318 bp 69.27 1.90 84.90
SCNpilot_expt_500_p_scaffold_34330
Species: Gemmatimonas aurantiaca (50%)
2 1571 bp 68.68 2.86 70.46
SCNpilot_expt_500_p_scaffold_38338
Species: Sandaracinus amylolyticus (50%)
2 1419 bp 71.04 3.17 100.21
SCNpilot_expt_500_p_scaffold_49131
Species: Hafnia alvei (50%)
2 1141 bp 70.11 1.31 85.98
SCNpilot_expt_500_p_scaffold_52971
Species: Myxococcus sp. (contaminant ex DSM 436) (50%)
2 1070 bp 69.25 3.27 98.97
SCNpilot_expt_500_p_scaffold_34333
Species: Sorangium cellulosum (50%)
2 1571 bp 63.40 2.86 100.06
SCNpilot_expt_500_p_scaffold_54948
Species: Streptomyces viridochromogenes (50%)
2 1037 bp 66.73 1.93 80.42
SCNpilot_expt_500_p_scaffold_53508 2 1061 bp 66.73 2.83 80.87
SCNpilot_expt_500_p_scaffold_44317
Species: Cystobacter fuscus (50%)
2 1247 bp 68.16 1.60 92.14
SCNpilot_expt_500_p_scaffold_21151
Species: Burkholderia caribensis (50%)
2 2439 bp 70.56 2.05 87.45
SCNpilot_expt_500_p_scaffold_40895
Species: Sorangium cellulosum (50%)
2 1338 bp 68.54 1.49 99.10
SCNpilot_expt_500_p_scaffold_50159
Species: Chondromyces apiculatus (50%)
2 1121 bp 71.01 1.00 97.95
SCNpilot_expt_500_p_scaffold_49648
Species: Sorangium cellulosum (100%)
2 1131 bp 68.61 1.00 90.72
SCNpilot_expt_500_p_scaffold_39714
Species: Lottia gigantea (50%)
2 1374 bp 54.00 2.18 94.54
SCNpilot_expt_500_p_scaffold_41874
Species: Sandaracinus amylolyticus (50%)
2 1310 bp 66.26 3.24 42.82
SCNpilot_expt_500_p_scaffold_32750
Species: RBG_16_Euryarchaeota_41_19_curated (50%)
2 1642 bp 64.07 2.13 78.01
SCNpilot_expt_500_p_scaffold_55277
Species: Sorangium cellulosum (50%)
2 1032 bp 69.28 1.45 84.30
SCNpilot_expt_500_p_scaffold_49398
Species: Oscillochloris trichoides (50%)
2 1136 bp 64.61 1.76 100.09
SCNpilot_expt_500_p_scaffold_37728
Species: Sorangium cellulosum (50%)
2 1441 bp 66.20 2.08 93.68
SCNpilot_expt_500_p_scaffold_36185 2 1496 bp 69.79 3.01 95.05
SCNpilot_expt_500_p_scaffold_41881
Species: Cystobacter fuscus (50%)
2 1310 bp 67.33 1.91 94.58
SCNpilot_expt_500_p_scaffold_46466
Species: GWC2_RIF_CHLX_73_18_curated (50%)
2 1197 bp 69.59 1.25 100.25
SCNpilot_expt_500_p_scaffold_54963 2 1037 bp 68.18 3.86 56.41
SCNpilot_expt_500_p_scaffold_38870
Species: Enhygromyxa salina (50%)
2 1401 bp 70.38 2.50 99.14
SCNpilot_expt_500_p_scaffold_49661
Species: Corallococcus coralloides (50%)
2 1131 bp 66.93 3.09 84.62
SCNpilot_expt_500_p_scaffold_35440
Species: Anaeromyxobacter sp. Fw109-5 (50%)
2 1526 bp 68.15 3.11 81.98
SCNpilot_expt_500_p_scaffold_41887
Species: Sorangium cellulosum (100%)
2 1310 bp 70.76 2.67 92.52
SCNpilot_expt_500_p_scaffold_46727
Species: Desulfovibrio africanus (50%)
2 1191 bp 67.84 1.68 100.25
SCNpilot_expt_500_p_scaffold_55287
Species: Chondromyces apiculatus (100%)
2 1032 bp 63.86 1.00 79.07
SCNpilot_expt_500_p_scaffold_54455
Species: Sorangium cellulosum (50%)
2 1046 bp 70.55 2.87 102.39
SCNpilot_expt_500_p_scaffold_47265
Species: Crinalium epipsammum (50%)
2 1180 bp 67.29 1.69 100.17
SCNpilot_expt_500_p_scaffold_38107
Species: Eimeria brunetti (50%)
2 1427 bp 71.20 3.15 73.37
SCNpilot_expt_500_p_scaffold_41890
Species: Sandaracinus amylolyticus (50%)
2 1310 bp 66.56 4.58 90.23
SCNpilot_expt_500_p_scaffold_55290
Species: Chondromyces apiculatus (50%)
2 1032 bp 64.53 1.94 100.00
SCNpilot_expt_500_p_scaffold_44082
Species: Ramlibacter tataouinensis (50%)
2 1252 bp 65.73 1.60 100.16
SCNpilot_expt_500_p_scaffold_44851
Species: Chondromyces apiculatus (50%)
2 1234 bp 71.15 2.43 100.16
SCNpilot_expt_500_p_scaffold_49668
Species: Sorangium cellulosum (50%)
2 1131 bp 65.96 1.77 63.93
SCNpilot_expt_500_p_scaffold_49926
Species: Chondromyces apiculatus (50%)
2 1126 bp 66.07 1.78 89.79
SCNpilot_expt_500_p_scaffold_51687
Species: BJP_08E140C01_Xanthomonadales_64_42 (50%)
2 1093 bp 62.58 1.37 41.17
SCNpilot_expt_500_p_scaffold_32769
Species: Burkholderia caribensis (50%)
2 1641 bp 69.29 1.83 95.98
SCNpilot_expt_500_p_scaffold_33289
Species: Actinoplanes missouriensis (50%)
2 1618 bp 68.23 3.40 101.42
SCNpilot_expt_500_p_scaffold_44090
Species: Sorangium cellulosum (50%)
2 1252 bp 68.13 1.20 57.75
SCNpilot_expt_500_p_scaffold_49675 2 1131 bp 71.88 3.32 82.23
SCNpilot_expt_500_p_scaffold_42324
Species: Myxococcus stipitatus (50%)
2 1298 bp 67.57 2.70 99.85
SCNpilot_expt_500_p_scaffold_51437
Species: Sorangium cellulosum (50%)
2 1098 bp 67.40 1.82 93.44
Displaying items 251-300 of 596 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.