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SCNPILOT_EXPT_750_BF_Myxococcales_68_20

SCNPILOT_EXPT_500_P_Proteobacteria_68_2
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 2.31 Longest contig: 2.50 Kbp Bin length: 758.00 Kbp GC content: 68.12 %
Contigs count: 596 Features count: 1082 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 2 / 55 BSCG 3 / 51 ASCG 1 / 38
Displaying items 301-350 of 596 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_36975
Species: Cystobacter violaceus (50%)
2 1468 bp 66.35 2.04 92.78
SCNpilot_expt_500_p_scaffold_43720
Species: CG_Delta_07 (50%)
2 1261 bp 67.88 3.97 87.55
SCNpilot_expt_500_p_scaffold_49936
Species: GWA2_Elusimicrobia_61_42_curated (50%)
2 1126 bp 65.99 2.22 100.18
SCNpilot_expt_500_p_scaffold_47537
Species: Sorangium cellulosum (50%)
2 1174 bp 71.29 1.00 97.62
SCNpilot_expt_500_p_scaffold_37243 2 1458 bp 63.51 2.74 77.16
SCNpilot_expt_500_p_scaffold_27076
Species: Sorangium cellulosum (50%)
2 1953 bp 66.26 2.05 95.70
SCNpilot_expt_500_p_scaffold_43723
Species: Chondromyces apiculatus (50%)
2 1261 bp 69.71 2.78 89.69
SCNpilot_expt_500_p_scaffold_43979
Species: Sorangium cellulosum (50%)
2 1255 bp 68.69 1.99 99.44
SCNpilot_expt_500_p_scaffold_47795
Species: Corallococcus coralloides (50%)
2 1168 bp 69.01 2.14 100.17
SCNpilot_expt_500_p_scaffold_53803
Species: Hyalangium minutum (50%)
2 1056 bp 66.00 2.37 54.55
SCNpilot_expt_500_p_scaffold_43724
Species: Chondromyces apiculatus (50%)
2 1261 bp 70.02 1.98 77.08
SCNpilot_expt_500_p_scaffold_51701 2 1093 bp 70.54 1.83 83.71
SCNpilot_expt_500_p_scaffold_52501 2 1078 bp 65.86 2.32 80.71
SCNpilot_expt_500_p_scaffold_53805
Species: Stigmatella aurantiaca (50%)
2 1056 bp 66.48 2.37 75.28
SCNpilot_expt_500_p_scaffold_39240
Species: Flavobacterium branchiophilum (50%)
2 1389 bp 65.87 1.08 95.25
SCNpilot_expt_500_p_scaffold_41401
Species: Myxococcus stipitatus (50%)
2 1324 bp 67.30 2.27 100.15
SCNpilot_expt_500_p_scaffold_49433
Species: Chondromyces apiculatus (50%)
2 1135 bp 68.46 1.76 77.97
SCNpilot_expt_500_p_scaffold_46242
Species: Sandaracinus amylolyticus (50%)
2 1202 bp 69.13 4.99 99.83
SCNpilot_expt_500_p_scaffold_24996
Species: Sorangium cellulosum (50%)
2 2099 bp 68.89 2.86 87.04
SCNpilot_expt_500_p_scaffold_57411
Species: Rhodococcus equi (50%)
2 1000 bp 69.30 3.00 100.20
SCNpilot_expt_500_p_scaffold_56644 2 1011 bp 68.84 2.97 87.54
SCNpilot_expt_500_p_scaffold_31870
Species: Cystobacter fuscus (50%)
2 1683 bp 66.37 1.78 37.97
SCNpilot_expt_500_p_scaffold_55317
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
2 1032 bp 69.67 1.00 100.00
SCNpilot_expt_500_p_scaffold_44365
Species: Stigmatella aurantiaca (50%)
2 1246 bp 69.58 2.81 81.38
SCNpilot_expt_500_p_scaffold_53813
Species: Sorangium cellulosum (100%)
2 1056 bp 68.84 2.84 87.50
SCNpilot_expt_500_p_scaffold_34127 2 1580 bp 67.22 1.27 82.59
SCNpilot_expt_500_p_scaffold_28079
Species: Roseiflexus sp. RS-1 (50%)
2 1888 bp 67.53 2.38 98.52
SCNpilot_expt_500_p_scaffold_51198
Species: Chondromyces apiculatus (50%)
2 1102 bp 65.43 3.18 68.33
SCNpilot_expt_500_p_scaffold_51454
Species: Haliangium ochraceum (50%)
2 1098 bp 69.31 3.19 100.00
SCNpilot_expt_500_p_scaffold_53046
Species: Polymorphum gilvum (50%)
2 1069 bp 68.38 1.00 101.87
SCNpilot_expt_500_p_scaffold_39760
Species: Enhygromyxa salina (50%)
2 1372 bp 68.08 1.00 88.34
SCNpilot_expt_500_p_scaffold_54232
Species: Chondromyces apiculatus (50%)
2 1050 bp 67.62 3.81 98.86
SCNpilot_expt_500_p_scaffold_50721 2 1111 bp 64.54 2.25 74.53
SCNpilot_expt_500_p_scaffold_35987
Species: Methylobacterium sp. 4-46 (50%)
2 1505 bp 66.25 2.99 80.13
SCNpilot_expt_500_p_scaffold_47042
Species: Candidatus Entotheonella sp. TSY1 (50%)
2 1185 bp 66.92 3.38 75.95
SCNpilot_expt_500_p_scaffold_44114 2 1252 bp 64.78 2.40 93.93
SCNpilot_expt_500_p_scaffold_57162 2 1003 bp 70.89 3.24 99.00
SCNpilot_expt_500_p_scaffold_34644
Species: Chondromyces apiculatus (50%)
2 1558 bp 66.88 1.44 80.30
SCNpilot_expt_500_p_scaffold_32540
Species: Candidatus Thiomargarita nelsonii (50%)
2 1652 bp 69.19 2.12 81.54
SCNpilot_expt_500_p_scaffold_48787
Species: Mycobacterium sp. KMS (50%)
2 1148 bp 67.94 4.36 98.00
SCNpilot_expt_500_p_scaffold_45795
Species: Chondromyces apiculatus (50%)
2 1212 bp 70.30 1.24 90.59
SCNpilot_expt_500_p_scaffold_38142
Species: Streptomyces himastatinicus (50%)
2 1426 bp 68.44 3.51 98.04
SCNpilot_expt_500_p_scaffold_34647
Species: Sorangium cellulosum (50%)
2 1558 bp 64.63 2.57 93.00
SCNpilot_expt_500_p_scaffold_39768
Species: Sorangium cellulosum (50%)
2 1372 bp 67.20 2.19 95.77
SCNpilot_expt_500_p_scaffold_43743
Species: Anaeromyxobacter sp. Fw109-5 (50%)
2 1261 bp 68.12 2.38 98.02
SCNpilot_expt_500_p_scaffold_49959 2 1125 bp 68.36 2.67 86.67
SCNpilot_expt_500_p_scaffold_39513
Species: Chondromyces apiculatus (50%)
2 1380 bp 61.23 3.44 90.43
SCNpilot_expt_500_p_scaffold_40696
Species: Chondromyces apiculatus (50%)
2 1345 bp 69.44 5.20 97.92
SCNpilot_expt_500_p_scaffold_48280
Species: Sorangium cellulosum (50%)
2 1159 bp 64.88 3.02 100.17
SCNpilot_expt_500_p_scaffold_57168
Species: Sorangium cellulosum (50%)
2 1003 bp 68.99 1.50 67.90
Displaying items 301-350 of 596 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.