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SCNpilot_expt_500_p_scaffold_18_curated

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Displaying items 31-60 of 328 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_18_curated_31
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

34470..35957
DNA (1488bp) protein (496aa)
Putative dipeptide transport system permease protein, dppB n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MF23_PARUW
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:CDZ80772.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
dppB; dipeptide transport system permease, dppB; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_expt_500_p_scaffold_18_curated_32
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

35961..37412
DNA (1452bp) protein (484aa)
Inner membrane ABC transporter permease protein yejE n=2 Tax=Parachlamydia acanthamoebae RepID=F8L1R0_PARAV
Inner membrane ABC transporter permease protein YejE {ECO:0000313|EMBL:CDZ80773.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
yejE; ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_expt_500_p_scaffold_18_curated_33
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(37555..37887)
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80774.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_34
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(37956..39236)
DNA (1281bp) protein (427aa)
acetyl-CoA acetyltransferase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A953
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:CDZ80775.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_35
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(39251..40093)
DNA (843bp) protein (281aa)
short-chain dehydrogenase n=1 Tax=Fischerella muscicola RepID=UPI0002D33EE2
General stress protein 39 {ECO:0000313|EMBL:CDZ80776.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
dehydrogenase
SCNpilot_expt_500_p_scaffold_18_curated_36
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(40172..41578)
DNA (1407bp) protein (469aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8A4_9CHLA
Low-affinity inorganic phosphate transporter 1 {ECO:0000313|EMBL:CDZ80777.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
phT2-1; inorganic phosphate transporter 2-1; K03306 inorganic phosphate transporter, PiT family
SCNpilot_expt_500_p_scaffold_18_curated_37
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(41581..42261)
DNA (681bp) protein (227aa)
UPF0111 protein CPn_0681/CP_0066/CPj0681/CpB0708 n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXB9_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ80778.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K07220 hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_38
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(42390..43049)
DNA (660bp) protein (220aa)
hypothetical protein, partial n=1 Tax=Legionella tunisiensis RepID=UPI0003767939
Ankyrin repeats (3 copies) {ECO:0000313|EMBL:CDZ80779.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Ankyrin repeat protein
SCNpilot_expt_500_p_scaffold_18_curated_39
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

43114..44133
DNA (1020bp) protein (340aa)
Probable ATP binding protein, component of oligopeptide permease, oppD n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MF28_PARUW
Stage 0 sporulation protein KD {ECO:0000313|EMBL:CDZ80780.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
oppD; ATP binding protein, component of oligopeptide permease, oppD; K02031 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_expt_500_p_scaffold_18_curated_40
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(44120..44455)
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KW73_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ80781.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_41
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

44526..45608
DNA (1083bp) protein (361aa)
Oligopeptide transport ATP-binding protein AppF n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXQ7_PARAV
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:CDZ80782.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
appF; oligopeptide transport ATP-binding protein AppF; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_500_p_scaffold_18_curated_42
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

45598..46356
DNA (759bp) protein (253aa)
blue fluorescent protein; K00540 [EC:1.-.-.-] rbh
Putative blue fluorescent protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MAU7_PARUW
NADP-dependent 3-hydroxy acid dehydrogenase YdfG {ECO:0000313|EMBL:CDZ80783.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_43
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(46316..48085)
DNA (1770bp) protein (590aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80784.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_44
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(48137..49165)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCP4_PARUW
Lysyl-tRNA synthetase {ECO:0000313|EMBL:CDZ80785.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_18_curated_45
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

49740..50462
DNA (723bp) protein (241aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
yjbC; ribosomal large chain pseudouridine synthase B; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Pseudouridine synthase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MEW5_PARUW
SCNpilot_expt_500_p_scaffold_18_curated_46
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

50443..51609
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KXR0_PARAV
Mitochondrial small ribosomal subunit Rsm22 {ECO:0000313|EMBL:CDZ80787.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_47
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

51602..52711
DNA (1110bp) protein (370aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80788.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_48
unknown

Not on your lists

52782..53090
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_18_curated_49
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

53174..53845
DNA (672bp) protein (224aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
gpmA; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1]
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXR5_PARAV
SCNpilot_expt_500_p_scaffold_18_curated_50
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

53842..55002
DNA (1161bp) protein (387aa)
nifS; iron-sulfur cofactor synthesis protein/cysteine desulfurase nifS; K04487 cysteine desulfurase [EC:2.8.1.7] rbh
Putative iron-sulfur cofactor synthesis protein/cysteine desulfurase nifS n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MEW3_PARUW
Cysteine desulfurase {ECO:0000313|EMBL:CDZ80790.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_51
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

55008..55793
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXR7_PARAV
SCAFFOLD protein {ECO:0000313|EMBL:CDZ80791.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K13819 NifU-like protein
SCNpilot_expt_500_p_scaffold_18_curated_52
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

55890..56615
DNA (726bp) protein (242aa)
ABC transporter, ATP-binding protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QG27_9CYAN
Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA {ECO:0000313|EMBL:CDZ80792.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
potA; ABC transporter, ATP-binding protein
SCNpilot_expt_500_p_scaffold_18_curated_53
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

56599..58122
DNA (1524bp) protein (508aa)
Glr0890 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM78_GLOVI
Glycine betaine/carnitine/choline transport system permease protein OpuCB {ECO:0000313|EMBL:CDZ80793.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
ABC transporter permease; K05846 osmoprotectant transport system permease protein rbh
SCNpilot_expt_500_p_scaffold_18_curated_54
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(58149..58565)
DNA (417bp) protein (139aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80794.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_55
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(58676..59398)
DNA (723bp) protein (241aa)
hypothetical protein; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Uncharacterized protein n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L4N4_SIMNZ
Bifunctional protein BirA {ECO:0000313|EMBL:CDZ80795.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_56
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

59574..60710
DNA (1137bp) protein (379aa)
Probable cell shape (Rod)-determining protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MEV9_PARUW
Rod shape-determining protein RodA {ECO:0000313|EMBL:CDZ80796.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
rodA; cell shape (rod)-determining protein; K05837 rod shape determining protein RodA rbh
SCNpilot_expt_500_p_scaffold_18_curated_57
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

60710..61141
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MEV8_PARUW
Uncharacterized protein {ECO:0000313|EMBL:CDZ80797.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_58
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

61152..61703
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Chlamydophila felis (strain Fe/C-56) RepID=Q256G2_CHLFF
Uncharacterized protein {ECO:0000313|EMBL:CDZ80798.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
ebp01; hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_59
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

61750..62805
DNA (1056bp) protein (352aa)
Putative polysaccharide export protein wza n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MET9_PARUW
Polysaccharide export protein Wza {ECO:0000313|EMBL:CDZ80799.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
wza; polysaccharide export protein wza; K01991 polysaccharide export outer membrane protein
SCNpilot_expt_500_p_scaffold_18_curated_60
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

62956..63147
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80800.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Displaying items 31-60 of 328 in total

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