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SCNpilot_expt_500_p_scaffold_18_curated

Search features with annotation key words

Displaying items 121-150 of 328 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_18_curated_121
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(138294..138677)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MB48_PARUW
Uncharacterized protein {ECO:0000313|EMBL:CDZ80861.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_122
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(138677..139627)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KX55_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ80862.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_123
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(139661..142372)
DNA (2712bp) protein (904aa)
Type III secretion outer membrane ring component n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KX56_PARAV
General secretion pathway protein D {ECO:0000313|EMBL:CDZ80863.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
sctC-B; type III secretion outer membrane ring component; K03219 type III secretion protein SctC
SCNpilot_expt_500_p_scaffold_18_curated_124
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(142699..144264)
DNA (1566bp) protein (522aa)
pkn; serine/threonine protein kinase; K00924 [EC:2.7.1.-] rbh
Putative serine/threonine protein kinase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBC4_PARUW
Serine/threonine-protein kinase StkP {ECO:0000313|EMBL:CDZ80864.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_125
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(144271..145611)
DNA (1341bp) protein (447aa)
Putative flagellar motor switch protein (= type III secretion translocase SctQ) n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBC5_PARUW
Type III secretion system protein {ECO:0000313|EMBL:CDZ80865.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
sctQ; type III secretion system protein; K02417 flagellar motor switch protein FliN/FliY
SCNpilot_expt_500_p_scaffold_18_curated_126
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(145940..146932)
DNA (993bp) protein (331aa)
Uncharacterized protein n=2 Tax=Waddlia chondrophila RepID=D6YSB8_WADCW
Uncharacterized protein {ECO:0000313|EMBL:CDZ80866.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_127
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(146944..147450)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBC7_PARUW
Flagellar FliJ protein {ECO:0000313|EMBL:CDZ80867.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_128
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(147461..148771)
DNA (1311bp) protein (437aa)
sctN, cdsN; type III secretion ATPase; K03224 ATP synthase in type III secretion protein SctN [EC:3.6.3.14]
Type III secretion ATPase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KX49_PARAV
Putative ATP synthase YscN {ECO:0000313|EMBL:CDZ80868.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_129
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(148790..149419)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBC9_PARUW
Uncharacterized protein {ECO:0000313|EMBL:CDZ80869.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_130
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(149445..149885)
DNA (441bp) protein (147aa)
Type III secretion needle formation regulating protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KX47_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ80870.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
sctG, cdsG; type III secretion needle formation regulating protein
SCNpilot_expt_500_p_scaffold_18_curated_131
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(150064..150306)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBD0_PARUW
Uncharacterized protein {ECO:0000313|EMBL:CDZ80871.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_132
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(150553..150801)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBD3_PARUW
Uncharacterized protein {ECO:0000313|EMBL:CDZ80872.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_133
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(150924..152753)
DNA (1830bp) protein (610aa)
Type III secretion integral inner membrane ring protein n=2 Tax=Waddlia chondrophila RepID=F8LF08_9CHLA
Type III secretion apparatus protein, YscD/HrpQ family {ECO:0000313|EMBL:CDZ80873.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
sctD; type III secretion system protein SctD
SCNpilot_expt_500_p_scaffold_18_curated_134
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(152802..153185)
DNA (384bp) protein (128aa)
Type III secretion T3S chaperone n=2 Tax=Waddlia chondrophila RepID=F8LF07_9CHLA
Tir chaperone protein (CesT) {ECO:0000313|EMBL:CDZ80874.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
sycE; type III secretion chaperone SycE
SCNpilot_expt_500_p_scaffold_18_curated_135
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(153391..154509)
DNA (1119bp) protein (373aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80875.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_136
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(154571..155134)
DNA (564bp) protein (188aa)
Type III secretion low calcium response chaperone LcrH/SycD n=1 Tax=Chlamydia psittaci 84/55 RepID=J9WS25_CHLPS
Chaperone protein IpgC {ECO:0000313|EMBL:CDZ80876.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
type III secretion low calcium response chaperone LcrH/SycD
SCNpilot_expt_500_p_scaffold_18_curated_137
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(155131..155580)
DNA (450bp) protein (150aa)
Type III secretion specific chlamydia chaperone 2 n=2 Tax=Parachlamydia acanthamoebae RepID=F8KWP9_PARAV
Chaperone protein IpgC {ECO:0000313|EMBL:CDZ80877.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
scc2-A; type III secretion specific chlamydia chaperone 2
SCNpilot_expt_500_p_scaffold_18_curated_138
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(155591..157306)
DNA (1716bp) protein (572aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80878.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_139
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(157334..158557)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KW45_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ80879.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_140
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(158643..161072)
DNA (2430bp) protein (810aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80880.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_141
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(161657..162907)
DNA (1251bp) protein (417aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=CLPX_PARUW rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX rbh
SCNpilot_expt_500_p_scaffold_18_curated_142
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(162927..163544)
DNA (618bp) protein (206aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
clpP2; ATP-dependent Clp protease proteolytic subunit 2; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYQ8_PARAV
SCNpilot_expt_500_p_scaffold_18_curated_143
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(163586..164902)
DNA (1317bp) protein (439aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Trigger factor n=2 Tax=Waddlia chondrophila RepID=F8LEZ4_9CHLA
tig; trigger factor; K03545 trigger factor
SCNpilot_expt_500_p_scaffold_18_curated_144
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

165470..168952
DNA (3483bp) protein (1161aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBF1_PARUW
ATP-dependent helicase HepA {ECO:0000313|EMBL:CDZ80884.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_18_curated_145
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

169007..170098
DNA (1092bp) protein (364aa)
Probable rod shape-determining protein mreB n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBF3_PARUW
Rod shape-determining protein MreB {ECO:0000313|EMBL:CDZ80885.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins rbh
SCNpilot_expt_500_p_scaffold_18_curated_146
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

170106..171884
DNA (1779bp) protein (593aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
pck; phosphoenolpyruvate carboxykinase; K01596 phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Waddlia chondrophila 2032/99 RepID=F8LEZ0_9CHLA
SCNpilot_expt_500_p_scaffold_18_curated_147
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

171881..173101
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R903_9CHLA
Autolysin {ECO:0000313|EMBL:CDZ80887.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_148
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

173161..173817
DNA (657bp) protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80888.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_149
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(173930..174091)
DNA (162bp) protein (54aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80889.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_150
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

174180..176054
DNA (1875bp) protein (625aa)
cadA-A; cadmium-transporting ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Putative cadmium-transporting ATPase n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KWB0_PARAV
Putative cadmium-transporting ATPase {ECO:0000313|EMBL:CDZ80890.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Displaying items 121-150 of 328 in total

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