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SCNpilot_expt_500_p_scaffold_18_curated_136

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(154571..155134)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion low calcium response chaperone LcrH/SycD n=1 Tax=Chlamydia psittaci 84/55 RepID=J9WS25_CHLPS similarity UNIREF
DB: UNIREF100
  • Identity: 34.7
  • Coverage: 170.0
  • Bit_score: 107
  • Evalue 1.40e-20
Chaperone protein IpgC {ECO:0000313|EMBL:CDZ80876.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 374
  • Evalue 8.50e-101
type III secretion low calcium response chaperone LcrH/SycD similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 170.0
  • Bit_score: 107
  • Evalue 4.40e-21

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Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 564
ATGAAATTAAATGAGGTTATTGAAACGCTCGTTTCCCAAAATACAAATCTTTCTGAAGAGGAAAAAAAACAACAAATAAAAGTTTTAGAAGAGCTGGTATATCAGAACAAAATTCCAGCTGACACATTAAATATCGATAGCAATGCCATAGAATTTATTTATGATTTTGCATCCCAACTCTATCGCCAAGGTAAATATGAACAAAGCATCGGGTTATTTACCATGTTAACGGGACTAGATCCCTTACAATATAGATTTTATATGGGACTTGGCTCTTGTTATCAAAAAAAACAAGATTGGATTGAGGCCTTAAAAGCTTTTTACACCGCTTACTTCATTAATACTAAAGATCCCATCCCTGCCTATCAAATTGCAGACTGCATGTTAAAACTCGATTCTCCAAATGAAGCTTATATTGCCTTACAAATGACTATTCAAAGGGCCGGAAATAATCCTATTTTTTCTTTTATCAAAAATCGAGCTGAATTGATGTATGACAGTCTCAAAGAACAGCTTAAATCGGGCGAGATAGAAGAAGATGTACCTAAAATTAGAAAAATTTAA
PROTEIN sequence
Length: 188
MKLNEVIETLVSQNTNLSEEEKKQQIKVLEELVYQNKIPADTLNIDSNAIEFIYDFASQLYRQGKYEQSIGLFTMLTGLDPLQYRFYMGLGSCYQKKQDWIEALKAFYTAYFINTKDPIPAYQIADCMLKLDSPNEAYIALQMTIQRAGNNPIFSFIKNRAELMYDSLKEQLKSGEIEEDVPKIRKI*