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SCNpilot_expt_500_p_scaffold_18_curated

Search features with annotation key words

Displaying items 1-30 of 328 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_18_curated_1
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

207..1400
DNA (1194bp) protein (398aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80740.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_2
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

1468..2652
DNA (1185bp) protein (395aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80741.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_3
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(2654..4012)
DNA (1359bp) protein (453aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80742.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_4
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(4108..4935)
DNA (828bp) protein (276aa)
Bifunctional RNase H/acid phosphatase {ECO:0000313|EMBL:CDZ80743.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_5
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(4974..6182)
DNA (1209bp) protein (403aa)
Putative choloylglycine hydrolase {ECO:0000313|EMBL:CDZ80744.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_6
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(6299..6916)
DNA (618bp) protein (206aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit n=1 Tax=Shewanella sp. (strain W3-18-1) RepID=A1RJI1_SHESW
Riboflavin synthase {ECO:0000313|EMBL:CDZ80745.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_7
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(6921..9500)
DNA (2580bp) protein (860aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
topA; DNA topoisomerase I/SWI domain fusion protein (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] rbh
DNA topoisomerase 1 n=1 Tax=Protochlamydia naegleriophila RepID=S4TLK9_9CHLA
SCNpilot_expt_500_p_scaffold_18_curated_8
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(9522..10544)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein dprA n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MF53_PARUW
DNA protecting protein DprA {ECO:0000313|EMBL:CDZ80747.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
dprA; protein required for chromosomal DNA transformation; K04096 DNA processing protein
SCNpilot_expt_500_p_scaffold_18_curated_9
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(10753..10938)
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80748.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_10
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(11236..11952)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044) RepID=D6YSL0_WADCW
Uncharacterized protein {ECO:0000313|EMBL:CDZ80749.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_11
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

12241..13032
DNA (792bp) protein (264aa)
Putative chromosome partitioning protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MF48_PARUW
Putative chromosome-partitioning protein ParB {ECO:0000313|EMBL:CDZ80750.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
parB; chromosome partitioning protein; K03497 chromosome partitioning protein, ParB family rbh
SCNpilot_expt_500_p_scaffold_18_curated_12
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

13032..14150
DNA (1119bp) protein (373aa)
Putative membrane protein n=2 Tax=Waddlia chondrophila RepID=D6YU88_WADCW
VWFA-related Acidobacterial domain protein {ECO:0000313|EMBL:CDZ80751.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K07114 uncharacterized protein
SCNpilot_expt_500_p_scaffold_18_curated_13
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

14147..16771
DNA (2625bp) protein (875aa)
Putative membrane protein n=2 Tax=Waddlia chondrophila RepID=D6YU89_WADCW
von Willebrand factor type A domain protein {ECO:0000313|EMBL:CDZ80752.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K07114 uncharacterized protein
SCNpilot_expt_500_p_scaffold_18_curated_14
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

16765..18426
DNA (1662bp) protein (554aa)
Uncharacterized protein n=2 Tax=Waddlia chondrophila RepID=D6YU91_WADCW
Uncharacterized protein {ECO:0000313|EMBL:CDZ80753.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_15
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

18423..19232
DNA (810bp) protein (270aa)
Putative membrane protein n=2 Tax=Waddlia chondrophila RepID=D6YU92_WADCW
Putative O-linked N-acetylglucosamine transferase, SPINDLY family {ECO:0000313|EMBL:CDZ80754.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_16
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

19306..19530
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80755.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_17
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

19767..20762
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KY12_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ80756.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_18
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

21056..23074
DNA (2019bp) protein (673aa)
nrdD; ribonucleoside triphosphate reductase; K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] rbh
Putative ribonucleoside triphosphate reductase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MF14_PARUW
Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CDZ80757.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_19
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

23312..23662
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80760.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_20
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

23668..24072
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80761.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_21
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(24088..24861)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KY85_PARAV
Putative phosphoesterase {ECO:0000313|EMBL:CDZ80762.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K07099
SCNpilot_expt_500_p_scaffold_18_curated_22
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(24861..26207)
DNA (1347bp) protein (449aa)
glgC; glucose-1-phosphate adenylyltransferase; K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] rbh
Glucose-1-phosphate adenylyltransferase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MF16_PARUW
Glucose-1-phosphate adenylyltransferase {ECO:0000313|EMBL:CDZ80763.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_23
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

26432..27220
DNA (789bp) protein (263aa)
Putative bacterial extracellular solute-binding protein n=2 Tax=Waddlia chondrophila RepID=D6YU42_WADCW
ABC transporter arginine-binding protein 1 {ECO:0000313|EMBL:CDZ80764.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
bacterial extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein
SCNpilot_expt_500_p_scaffold_18_curated_24
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(27205..27942)
DNA (738bp) protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80765.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_25
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

28073..28219
DNA (147bp) protein (49aa)
YHS domain protein n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9KBY4_THENN
YHS domain protein {ECO:0000313|EMBL:CDZ80766.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
YHS domain protein
SCNpilot_expt_500_p_scaffold_18_curated_26
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(28253..28654)
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80767.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_27
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(28756..31338)
DNA (2583bp) protein (861aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
glgP-B; glycogen phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1]
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAM6_9CHLA
SCNpilot_expt_500_p_scaffold_18_curated_28
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

31528..31677
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80769.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_18_curated_29
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

31683..32369
DNA (687bp) protein (229aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXJ6_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ80770.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K09792 hypothetical protein
SCNpilot_expt_500_p_scaffold_18_curated_30
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

32372..34489
DNA (2118bp) protein (706aa)
Putative substrate binding proteins, component of oligopeptide permease, oppA n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MF22_PARUW
Oligopeptide-binding protein AppA {ECO:0000313|EMBL:CDZ80771.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
oppA; substrate binding proteins, component of oligopeptide permease, oppA; K02035 peptide/nickel transport system substrate-binding protein rbh
Displaying items 1-30 of 328 in total

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